BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9m19
(250 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant r... 23 2.2
X95913-1|CAA65157.1| 178|Anopheles gambiae immune factor protein. 21 5.1
X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein. 21 5.1
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 21 5.1
DQ013848-1|AAY40257.1| 304|Anopheles gambiae CYP325D1 protein. 21 5.1
AY341182-1|AAR13746.1| 191|Anopheles gambiae Gambif protein. 21 5.1
AY341181-1|AAR13745.1| 191|Anopheles gambiae Gambif protein. 21 5.1
AY341180-1|AAR13744.1| 191|Anopheles gambiae Gambif protein. 21 5.1
AY341179-1|AAR13743.1| 191|Anopheles gambiae Gambif protein. 21 5.1
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 21 6.7
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 21 6.7
>AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant
receptor Or2 protein.
Length = 378
Score = 22.6 bits (46), Expect = 2.2
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 157 PFLLLSNF*FISPLAS*HESENFLINLMFNLFITHLVLENTFKKPIINNLK 5
P +L+ F F+ +S + +IN F + +LVL +F +IN K
Sbjct: 36 PVAVLNVFQFLKLYSSWGDMSELIINGYFTVLYFNLVLRTSFL--VINRRK 84
>X95913-1|CAA65157.1| 178|Anopheles gambiae immune factor protein.
Length = 178
Score = 21.4 bits (43), Expect = 5.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 173 LSMRQETRVDSSRSG 217
L +RQE RVD R+G
Sbjct: 91 LRLRQEIRVDPFRTG 105
>X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein.
Length = 696
Score = 21.4 bits (43), Expect = 5.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 173 LSMRQETRVDSSRSG 217
L +RQE RVD R+G
Sbjct: 161 LRLRQEIRVDPFRTG 175
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 21.4 bits (43), Expect = 5.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 54 CVMNKLNIKLIRKFSDSCQ 110
C M + N KL+ + + CQ
Sbjct: 132 CAMKEQNAKLLEQITGMCQ 150
>DQ013848-1|AAY40257.1| 304|Anopheles gambiae CYP325D1 protein.
Length = 304
Score = 21.4 bits (43), Expect = 5.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 88 LINLMFNLFITHLVLENTFKKPIINNL 8
L+N++F+ + V+E K I+NNL
Sbjct: 34 LLNVIFSTTLGANVVEEREAKHILNNL 60
>AY341182-1|AAR13746.1| 191|Anopheles gambiae Gambif protein.
Length = 191
Score = 21.4 bits (43), Expect = 5.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 173 LSMRQETRVDSSRSG 217
L +RQE RVD R+G
Sbjct: 97 LRLRQEIRVDPFRTG 111
>AY341181-1|AAR13745.1| 191|Anopheles gambiae Gambif protein.
Length = 191
Score = 21.4 bits (43), Expect = 5.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 173 LSMRQETRVDSSRSG 217
L +RQE RVD R+G
Sbjct: 97 LRLRQEIRVDPFRTG 111
>AY341180-1|AAR13744.1| 191|Anopheles gambiae Gambif protein.
Length = 191
Score = 21.4 bits (43), Expect = 5.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 173 LSMRQETRVDSSRSG 217
L +RQE RVD R+G
Sbjct: 97 LRLRQEIRVDPFRTG 111
>AY341179-1|AAR13743.1| 191|Anopheles gambiae Gambif protein.
Length = 191
Score = 21.4 bits (43), Expect = 5.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 173 LSMRQETRVDSSRSG 217
L +RQE RVD R+G
Sbjct: 97 LRLRQEIRVDPFRTG 111
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 21.0 bits (42), Expect = 6.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 51 RCVMNKLNIKLIRKFSDSCQEASGEINQKLDSS 149
RC + L +R+ + C +G +N +DSS
Sbjct: 947 RCRLLGLEPLSVRRRNAQCSFIAGLLNGSIDSS 979
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 170 CLSMRQETRVDSSR 211
CL+++++TRV S R
Sbjct: 916 CLAIKEDTRVHSRR 929
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,824
Number of Sequences: 2352
Number of extensions: 2423
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12740367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -