Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9m19
(250 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022093-1|AAY33509.1| 527|Drosophila melanogaster AT20029p pro... 29 0.86
AE013599-1763|AAF58338.1| 527|Drosophila melanogaster CG13340-P... 29 0.86
DQ062764-1|AAY56637.1| 524|Drosophila melanogaster unknown prot... 27 2.6
BT003650-1|AAO39654.1| 524|Drosophila melanogaster AT09752p pro... 27 2.6
AY061822-1|AAL27633.1| 524|Drosophila melanogaster GH10924p pro... 27 2.6
AE014296-1823|AAN11918.1| 524|Drosophila melanogaster CG32064-P... 27 2.6
AY050231-1|AAK84930.1| 559|Drosophila melanogaster SD01637p pro... 27 3.5
AY047564-1|AAK77296.1| 534|Drosophila melanogaster GH07689p pro... 27 3.5
AE013599-2399|AAS64825.1| 559|Drosophila melanogaster CG8963-PB... 27 3.5
AE013599-2398|AAF57917.1| 559|Drosophila melanogaster CG8963-PA... 27 3.5
AE013599-2289|AAF57992.1| 534|Drosophila melanogaster CG4439-PA... 27 3.5
AY395750-1|AAR89513.1| 1199|Drosophila melanogaster ATM protein ... 26 6.1
AY113471-1|AAM29476.1| 445|Drosophila melanogaster RE43153p pro... 26 6.1
AY113192-1|AAM29197.1| 574|Drosophila melanogaster AT01448p pro... 26 6.1
AE014298-794|AAF46080.2| 445|Drosophila melanogaster CG3097-PA ... 26 6.1
AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB... 26 6.1
>BT022093-1|AAY33509.1| 527|Drosophila melanogaster AT20029p
protein.
Length = 527
Score = 29.1 bits (62), Expect = 0.86
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 153 KGLVLGVYQC--GKKLELTPVGQELDQKSGGE 242
KG+V+G+YQ K +LTP G ++DQ+ G+
Sbjct: 40 KGVVVGLYQKEGDKDPKLTPAGHKIDQRVQGK 71
>AE013599-1763|AAF58338.1| 527|Drosophila melanogaster CG13340-PA
protein.
Length = 527
Score = 29.1 bits (62), Expect = 0.86
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 153 KGLVLGVYQC--GKKLELTPVGQELDQKSGGE 242
KG+V+G+YQ K +LTP G ++DQ+ G+
Sbjct: 40 KGVVVGLYQKEGDKDPKLTPAGHKIDQRVQGK 71
>DQ062764-1|AAY56637.1| 524|Drosophila melanogaster unknown
protein.
Length = 524
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 147 SKKGLVLGVYQ--CGKKLELTPVGQELDQKSGGE 242
S KGLV+GVYQ +LTP G++++ + G+
Sbjct: 34 SSKGLVVGVYQKENDNDPKLTPAGEKVNDRLHGK 67
>BT003650-1|AAO39654.1| 524|Drosophila melanogaster AT09752p
protein.
Length = 524
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 147 SKKGLVLGVYQ--CGKKLELTPVGQELDQKSGGE 242
S KGLV+GVYQ +LTP G++++ + G+
Sbjct: 34 SSKGLVVGVYQKENDNDPKLTPAGEKVNDRLHGK 67
>AY061822-1|AAL27633.1| 524|Drosophila melanogaster GH10924p
protein.
Length = 524
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 147 SKKGLVLGVYQ--CGKKLELTPVGQELDQKSGGE 242
S KGLV+GVYQ +LTP G++++ + G+
Sbjct: 34 SSKGLVVGVYQKENDNDPKLTPAGEKVNDRLHGK 67
>AE014296-1823|AAN11918.1| 524|Drosophila melanogaster CG32064-PA
protein.
Length = 524
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 147 SKKGLVLGVYQ--CGKKLELTPVGQELDQKSGGE 242
S KGLV+GVYQ +LTP G++++ + G+
Sbjct: 34 SSKGLVVGVYQKENDNDPKLTPAGEKVNDRLHGK 67
>AY050231-1|AAK84930.1| 559|Drosophila melanogaster SD01637p
protein.
Length = 559
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 216 PDRLESTLVSCRIDKHQE 163
PD L TL+ C++D HQE
Sbjct: 343 PDSLFHTLLKCKLDYHQE 360
>AY047564-1|AAK77296.1| 534|Drosophila melanogaster GH07689p
protein.
Length = 534
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 105 CQEASGEINQKLDSSKKGLVLGVY--QCGKKLELTPVGQELDQKSGGE 242
C+ G N + +G+V+G+Y K L+L+P G++ D + GG+
Sbjct: 37 CKSEDGSCNT---CNLQGVVVGLYAKDGDKGLKLSPGGEKFDDRVGGK 81
>AE013599-2399|AAS64825.1| 559|Drosophila melanogaster CG8963-PB,
isoform B protein.
Length = 559
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 216 PDRLESTLVSCRIDKHQE 163
PD L TL+ C++D HQE
Sbjct: 343 PDSLFHTLLKCKLDYHQE 360
>AE013599-2398|AAF57917.1| 559|Drosophila melanogaster CG8963-PA,
isoform A protein.
Length = 559
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 216 PDRLESTLVSCRIDKHQE 163
PD L TL+ C++D HQE
Sbjct: 343 PDSLFHTLLKCKLDYHQE 360
>AE013599-2289|AAF57992.1| 534|Drosophila melanogaster CG4439-PA
protein.
Length = 534
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 105 CQEASGEINQKLDSSKKGLVLGVY--QCGKKLELTPVGQELDQKSGGE 242
C+ G N + +G+V+G+Y K L+L+P G++ D + GG+
Sbjct: 37 CKSEDGSCNT---CNLQGVVVGLYAKDGDKGLKLSPGGEKFDDRVGGK 81
>AY395750-1|AAR89513.1| 1199|Drosophila melanogaster ATM protein
protein.
Length = 1199
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 6 FKLFIMGFLKVFSKT--RCVMNKLNIKLIRKFSDSCQEASGEINQKLDSSKKGLVLGVYQ 179
+++ + F SK C+ +++ KF + + + +N K S KGL + Q
Sbjct: 671 YRIISLWFTNATSKQCQECIKDEILTVPSYKFICAANQLTARLNSKNTSLLKGLTDLLVQ 730
Query: 180 CGK 188
CGK
Sbjct: 731 CGK 733
>AY113471-1|AAM29476.1| 445|Drosophila melanogaster RE43153p
protein.
Length = 445
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 117 SGEINQKLDSSKKGLVLGVYQCGKKLELTPVGQELDQKSGG 239
+ EI Q+ D ++ + + + +K PVGQ L+QK GG
Sbjct: 34 ANEIPQRYDEAQLWRIYNISEAMQKR--VPVGQMLEQKFGG 72
>AY113192-1|AAM29197.1| 574|Drosophila melanogaster AT01448p
protein.
Length = 574
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 6 FKLFIMGFLKVFSKT--RCVMNKLNIKLIRKFSDSCQEASGEINQKLDSSKKGLVLGVYQ 179
+++ + F SK C+ +++ KF + + + +N K S KGL + Q
Sbjct: 46 YRIISLWFTNATSKQCQECIKDEILTVPSYKFICAANQLTARLNSKNTSLLKGLTDLLVQ 105
Query: 180 CGK 188
CGK
Sbjct: 106 CGK 108
>AE014298-794|AAF46080.2| 445|Drosophila melanogaster CG3097-PA
protein.
Length = 445
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 117 SGEINQKLDSSKKGLVLGVYQCGKKLELTPVGQELDQKSGG 239
+ EI Q+ D ++ + + + +K PVGQ L+QK GG
Sbjct: 34 ANEIPQRYDEAQLWRIYNISEAMQKR--VPVGQMLEQKFGG 72
>AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB
protein.
Length = 2767
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 6 FKLFIMGFLKVFSKT--RCVMNKLNIKLIRKFSDSCQEASGEINQKLDSSKKGLVLGVYQ 179
+++ + F SK C+ +++ KF + + + +N K S KGL + Q
Sbjct: 2239 YRIISLWFTNATSKQCQECIKDEILTVPSYKFICAANQLTARLNSKNTSLLKGLTDLLVQ 2298
Query: 180 CGK 188
CGK
Sbjct: 2299 CGK 2301
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,791,205
Number of Sequences: 53049
Number of extensions: 105699
Number of successful extensions: 227
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -