SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9m17
         (459 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB125267-1|BAD17859.1|  913|Homo sapiens integral membrane prote...    31   1.9  
BT007194-1|AAP35858.1|  467|Homo sapiens zinc finger protein 297...    29   7.7  
BC037290-1|AAH37290.1|  360|Homo sapiens potassium inwardly-rect...    29   7.7  
BC008828-1|AAH08828.1|  467|Homo sapiens zinc finger and BTB dom...    29   7.7  
AY758241-1|AAX08099.1|  360|Homo sapiens inwardly-rectifying pot...    29   7.7  
AL161731-4|CAI40920.1|  467|Homo sapiens zinc finger and BTB dom...    29   7.7  
AL161731-3|CAI40919.1|  196|Homo sapiens zinc finger and BTB dom...    29   7.7  
AJ007557-1|CAA07552.1|  360|Homo sapiens inwardly-rectifying pot...    29   7.7  
AJ006128-1|CAA06878.1|  360|Homo sapiens inwardly rectifying pot...    29   7.7  
AF061118-1|AAC15769.1|  360|Homo sapiens inward rectifier potass...    29   7.7  
AF049907-1|AAC05500.1|  467|Homo sapiens zinc finger transcripti...    29   7.7  
AC064852-2|AAX93190.1|  360|Homo sapiens unknown protein.              29   7.7  
AB013891-1|BAA28273.1|  360|Homo sapiens inward rectifier potass...    29   7.7  
AB013889-1|BAA28271.1|  360|Homo sapiens inward rectifier potass...    29   7.7  
AB007874-1|BAA24844.2|  492|Homo sapiens KIAA0414 protein.             29   7.7  

>AB125267-1|BAD17859.1|  913|Homo sapiens integral membrane protein
           GDD1 protein.
          Length = 913

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 306 PHISHKWTHNMNKQYTPAVIL*LVTVFEHSVFLIKFTVS 190
           P   +K+ HNM   +  A  +  + V EH VFL+KF ++
Sbjct: 813 PDDENKYFHNMQFWHVLAAKMTFIIVMEHVVFLVKFLLA 851


>BT007194-1|AAP35858.1|  467|Homo sapiens zinc finger protein 297B
           protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +1

Query: 64  QNVVRSYRTKYIFMP------FRTKNRFIILWHIIDKCNGDLHNN 180
           +N++ S  T  + MP      + T   F+ +WH++DKC   L  N
Sbjct: 82  ENILLSSYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGN 126


>BC037290-1|AAH37290.1|  360|Homo sapiens potassium
           inwardly-rectifying channel, subfamily J, member 13
           protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 127 FIILWHIIDKCNGDLHNNHD 186
           F +LW+++ + NGDL  +HD
Sbjct: 71  FAVLWYVLAEMNGDLELDHD 90


>BC008828-1|AAH08828.1|  467|Homo sapiens zinc finger and BTB domain
           containing 43 protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +1

Query: 64  QNVVRSYRTKYIFMP------FRTKNRFIILWHIIDKCNGDLHNN 180
           +N++ S  T  + MP      + T   F+ +WH++DKC   L  N
Sbjct: 82  ENILLSSYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGN 126


>AY758241-1|AAX08099.1|  360|Homo sapiens inwardly-rectifying
           potassium channel Kir7.1 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 127 FIILWHIIDKCNGDLHNNHD 186
           F +LW+++ + NGDL  +HD
Sbjct: 71  FAVLWYVLAEMNGDLELDHD 90


>AL161731-4|CAI40920.1|  467|Homo sapiens zinc finger and BTB domain
           containing 43 protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +1

Query: 64  QNVVRSYRTKYIFMP------FRTKNRFIILWHIIDKCNGDLHNN 180
           +N++ S  T  + MP      + T   F+ +WH++DKC   L  N
Sbjct: 82  ENILLSSYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGN 126


>AL161731-3|CAI40919.1|  196|Homo sapiens zinc finger and BTB domain
           containing 43 protein.
          Length = 196

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +1

Query: 64  QNVVRSYRTKYIFMP------FRTKNRFIILWHIIDKCNGDLHNN 180
           +N++ S  T  + MP      + T   F+ +WH++DKC   L  N
Sbjct: 82  ENILLSSYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGN 126


>AJ007557-1|CAA07552.1|  360|Homo sapiens inwardly-rectifying
           potassium channel protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 127 FIILWHIIDKCNGDLHNNHD 186
           F +LW+++ + NGDL  +HD
Sbjct: 71  FAVLWYVLAEMNGDLELDHD 90


>AJ006128-1|CAA06878.1|  360|Homo sapiens inwardly rectifying
           potassium channel Kir7.1 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 127 FIILWHIIDKCNGDLHNNHD 186
           F +LW+++ + NGDL  +HD
Sbjct: 71  FAVLWYVLAEMNGDLELDHD 90


>AF061118-1|AAC15769.1|  360|Homo sapiens inward rectifier potassium
           channel Kir 7.1 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 127 FIILWHIIDKCNGDLHNNHD 186
           F +LW+++ + NGDL  +HD
Sbjct: 71  FAVLWYVLAEMNGDLELDHD 90


>AF049907-1|AAC05500.1|  467|Homo sapiens zinc finger transcription
           factor protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +1

Query: 64  QNVVRSYRTKYIFMP------FRTKNRFIILWHIIDKCNGDLHNN 180
           +N++ S  T  + MP      + T   F+ +WH++DKC   L  N
Sbjct: 82  ENILLSSYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGN 126


>AC064852-2|AAX93190.1|  360|Homo sapiens unknown protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 127 FIILWHIIDKCNGDLHNNHD 186
           F +LW+++ + NGDL  +HD
Sbjct: 71  FAVLWYVLAEMNGDLELDHD 90


>AB013891-1|BAA28273.1|  360|Homo sapiens inward rectifier potassium
           channel Kir7.1 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 127 FIILWHIIDKCNGDLHNNHD 186
           F +LW+++ + NGDL  +HD
Sbjct: 71  FAVLWYVLAEMNGDLELDHD 90


>AB013889-1|BAA28271.1|  360|Homo sapiens inward rectifier potassium
           channel Kir7.1 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 127 FIILWHIIDKCNGDLHNNHD 186
           F +LW+++ + NGDL  +HD
Sbjct: 71  FAVLWYVLAEMNGDLELDHD 90


>AB007874-1|BAA24844.2|  492|Homo sapiens KIAA0414 protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +1

Query: 64  QNVVRSYRTKYIFMP------FRTKNRFIILWHIIDKCNGDLHNN 180
           +N++ S  T  + MP      + T   F+ +WH++DKC   L  N
Sbjct: 107 ENILLSSYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGN 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,680,308
Number of Sequences: 237096
Number of extensions: 1205580
Number of successful extensions: 2714
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2714
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -