Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9m15
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82260-5|CAB05133.1|  194|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U32305-15|AAK18858.4|  567|Caenorhabditis elegans Hypothetical p...    30   1.3  
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AC024761-4|AAF59466.2|  332|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z82260-9|CAB05137.1|  195|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z82260-6|CAB05134.1|  195|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AL132948-6|CAC51070.1|  395|Caenorhabditis elegans Hypothetical ...    28   7.1  
AC006830-3|AAP13735.1|  348|Caenorhabditis elegans Serpentine re...    27   9.4  

>Z82260-5|CAB05133.1|  194|Caenorhabditis elegans Hypothetical
           protein C32H11.6 protein.
          Length = 194

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = +3

Query: 270 LSEILKNSSMEIRETPPLFQQIDENFYAYTSFLKSYQKYNKLTPSDVHNIDTIVIGKAQS 449
           LSEI+ N +  + +     Q++DE F      +    K  +L    V N     +G   +
Sbjct: 109 LSEIIANKNQTLSQVGTAIQELDEKFNLEVQLIFILSKILRLNEKIVMNGGLNEVGNEAT 168

Query: 450 EPSFR 464
           E SFR
Sbjct: 169 ENSFR 173


>U32305-15|AAK18858.4|  567|Caenorhabditis elegans Hypothetical
           protein B0336.11a protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +2

Query: 14  TVLDCIFFRK*NIKIDEESAQIIHRNHEEILPTYSHRHLSDQRSNVTHIPPRILP 178
           T  D   F+K N+K DEES         +  P+ S R     +S  +HIPP + P
Sbjct: 290 TEFDFSSFQKRNVKFDEESTT-------KRAPSLSRRSSRGPKSRKSHIPPSLRP 337


>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical protein
            W05B2.4 protein.
          Length = 2265

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 533  FCDSSITEFSCFGFIIVVKPNITAETGFTLRL 438
            FC SSI + S  G I++V PN+     +++RL
Sbjct: 1621 FCQSSIDKDSAIGNIMIVTPNMDRLLFYSIRL 1652


>AC024761-4|AAF59466.2|  332|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.6 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +3

Query: 234 IEFCGPGFNATMLSEILKNSSMEIRETPPLFQQIDENFYAYTSFLKSYQKYNKLTPSDVH 413
           ++ C P      +SEIL+++S + ++    +Q+I++    Y + + S  KY +L   D  
Sbjct: 251 VQKCNPVI-IQCVSEILESASEKDQKE---WQEINQKLEEYQNTVSSADKYTELGARDFQ 306

Query: 414 NIDTIV 431
            IDT++
Sbjct: 307 LIDTVL 312


>Z82260-9|CAB05137.1|  195|Caenorhabditis elegans Hypothetical
           protein C32H11.11 protein.
          Length = 195

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +3

Query: 270 LSEILKNSSMEIRETPPLFQQIDENFYAYTSFLKSYQKYNKLTPSDVHNIDTIVIGKAQS 449
           LSEI+ N +  + +     Q++DE F      +    K  +L    V N     +G   +
Sbjct: 109 LSEIIANKNQTLSQVGAAIQELDEKFNLEVQLIFILSKILRLNEKIVMNGGLNEVGNEAT 168

Query: 450 EPSFR 464
             SFR
Sbjct: 169 GNSFR 173


>Z82260-6|CAB05134.1|  195|Caenorhabditis elegans Hypothetical
           protein C32H11.8 protein.
          Length = 195

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +3

Query: 270 LSEILKNSSMEIRETPPLFQQIDENFYAYTSFLKSYQKYNKLTPSDVHNIDTIVIGKAQS 449
           LSEI+ N +  + +     Q++DE F      +    K  +L    V N     +G   +
Sbjct: 109 LSEIIANKNQTLSQVGAAIQELDEKFNLEVQLIFILSKILRLNEKIVMNGGLNEVGNEAT 168

Query: 450 EPSFR 464
             SFR
Sbjct: 169 GNSFR 173


>AL132948-6|CAC51070.1|  395|Caenorhabditis elegans Hypothetical
           protein Y39B6A.7 protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 212 WKTWTVGDRILRTR 253
           W TW VGDR++ TR
Sbjct: 79  WLTWKVGDRVVETR 92


>AC006830-3|AAP13735.1|  348|Caenorhabditis elegans Serpentine
           receptor, class w protein3 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 159 YRHEYYRLRYVLEVLNFFGKPGLSEIEF 242
           YR  YY   YV+ +L FFG  G++ I F
Sbjct: 11  YREAYYVFNYVICILQFFGF-GINLIHF 37


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,096,898
Number of Sequences: 27780
Number of extensions: 317455
Number of successful extensions: 894
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)