Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9m15
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   3.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.3  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   8.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   8.3  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 677 CINRNKSINRCMYG 636
           CIN NKS ++C  G
Sbjct: 118 CINANKSTDKCENG 131


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 480 QTKYYSGNWVHSAPYRLLSYLYCVHRMGSTCYI 382
           +T+YY  NW       L + L  V  +G+T  I
Sbjct: 27  RTEYYLPNWTDLVLAGLFTMLIIVTIVGNTLVI 59


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 483 CQTKYYSGNWVHSAPYRLLSYLYC 412
           C+  YY+ N++   P  +   +YC
Sbjct: 109 CKKLYYNINYIEQIPVPVPVPIYC 132


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 178 GFVMYWKCLISLEN 219
           GF+++W+   SLEN
Sbjct: 10  GFLLFWQNSASLEN 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,717
Number of Sequences: 438
Number of extensions: 4420
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)