Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9m10
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U25435-1|AAB07788.1|  727|Homo sapiens CTCF protein.                   30   7.5  
BT009915-1|AAP88917.1|  727|Homo sapiens CCCTC-binding factor (z...    30   7.5  
BC014267-1|AAH14267.1|  727|Homo sapiens CCCTC-binding factor (z...    30   7.5  
AF145477-1|AAF31318.1|  727|Homo sapiens transcriptional repress...    30   7.5  
AB209793-1|BAD93030.1|  443|Homo sapiens CCCTC-binding factor (z...    30   7.5  

>U25435-1|AAB07788.1|  727|Homo sapiens CTCF protein.
          Length = 727

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 20/77 (25%), Positives = 34/77 (44%)
 Frame = -2

Query: 702 FLSYDTIFNRGQMKRNHQNPF*L*AQGSLKYIKCIIYEKH**KQNSSKPFQNTLCSAARS 523
           F++   +    + K  H+ PF   +      ++    ++H       +PFQ +LCS A  
Sbjct: 331 FVTSGELVRHRRYKHTHEKPFKC-SMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASR 389

Query: 522 DLYIYNVFIIKRHYRTY 472
           D Y      +KRH RT+
Sbjct: 390 DTY-----KLKRHMRTH 401


>BT009915-1|AAP88917.1|  727|Homo sapiens CCCTC-binding factor (zinc
           finger protein) protein.
          Length = 727

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 20/77 (25%), Positives = 34/77 (44%)
 Frame = -2

Query: 702 FLSYDTIFNRGQMKRNHQNPF*L*AQGSLKYIKCIIYEKH**KQNSSKPFQNTLCSAARS 523
           F++   +    + K  H+ PF   +      ++    ++H       +PFQ +LCS A  
Sbjct: 331 FVTSGELVRHRRYKHTHEKPFKC-SMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASR 389

Query: 522 DLYIYNVFIIKRHYRTY 472
           D Y      +KRH RT+
Sbjct: 390 DTY-----KLKRHMRTH 401


>BC014267-1|AAH14267.1|  727|Homo sapiens CCCTC-binding factor (zinc
           finger protein) protein.
          Length = 727

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 20/77 (25%), Positives = 34/77 (44%)
 Frame = -2

Query: 702 FLSYDTIFNRGQMKRNHQNPF*L*AQGSLKYIKCIIYEKH**KQNSSKPFQNTLCSAARS 523
           F++   +    + K  H+ PF   +      ++    ++H       +PFQ +LCS A  
Sbjct: 331 FVTSGELVRHRRYKHTHEKPFKC-SMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASR 389

Query: 522 DLYIYNVFIIKRHYRTY 472
           D Y      +KRH RT+
Sbjct: 390 DTY-----KLKRHMRTH 401


>AF145477-1|AAF31318.1|  727|Homo sapiens transcriptional repressor
           CTCF protein.
          Length = 727

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 20/77 (25%), Positives = 34/77 (44%)
 Frame = -2

Query: 702 FLSYDTIFNRGQMKRNHQNPF*L*AQGSLKYIKCIIYEKH**KQNSSKPFQNTLCSAARS 523
           F++   +    + K  H+ PF   +      ++    ++H       +PFQ +LCS A  
Sbjct: 331 FVTSGELVRHRRYKHTHEKPFKC-SMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASR 389

Query: 522 DLYIYNVFIIKRHYRTY 472
           D Y      +KRH RT+
Sbjct: 390 DTY-----KLKRHMRTH 401


>AB209793-1|BAD93030.1|  443|Homo sapiens CCCTC-binding factor (zinc
           finger protein) variant protein.
          Length = 443

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 20/77 (25%), Positives = 34/77 (44%)
 Frame = -2

Query: 702 FLSYDTIFNRGQMKRNHQNPF*L*AQGSLKYIKCIIYEKH**KQNSSKPFQNTLCSAARS 523
           F++   +    + K  H+ PF   +      ++    ++H       +PFQ +LCS A  
Sbjct: 47  FVTSGELVRHRRYKHTHEKPFKC-SMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASR 105

Query: 522 DLYIYNVFIIKRHYRTY 472
           D Y      +KRH RT+
Sbjct: 106 DTY-----KLKRHMRTH 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,640,459
Number of Sequences: 237096
Number of extensions: 1747853
Number of successful extensions: 2932
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2932
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)