Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9m10
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation...    29   4.5  
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini...    29   4.5  
AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
            germline protein5 protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 88   KTLK*TLKSHYELLSSCTKRISRTRKTLCSTFYQYQIQTQSAKG 219
            K L   +  H  L+ SC + +SR +K +CS F++   +    +G
Sbjct: 1055 KQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEG 1098


>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
            protein MOG-5 protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 88   KTLK*TLKSHYELLSSCTKRISRTRKTLCSTFYQYQIQTQSAKG 219
            K L   +  H  L+ SC + +SR +K +CS F++   +    +G
Sbjct: 1055 KQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEG 1098


>AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical
           protein C40A11.7 protein.
          Length = 220

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 495 IKRHYRTYISSDKI-QIFTVNKKPYHVLKITLNKNEFIYL 379
           I    RTY SS ++ QI    KKP  V+    + N+ IY+
Sbjct: 101 INNQIRTYRSSHELLQIIASTKKPVVVINYITHNNDIIYI 140


>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 220 SLARLMALKPLIKTEKRRDLTDHRYN 297
           S A    ++P +KTEK+R+  D RYN
Sbjct: 593 SKAAYSIVRPNLKTEKQRESIDSRYN 618


>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 220 SLARLMALKPLIKTEKRRDLTDHRYN 297
           S A    ++P +KTEK+R+  D RYN
Sbjct: 593 SKAAYSIVRPNLKTEKQRESIDSRYN 618


>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
           protein C33E10.6 protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 513 IYNVFIIKRHYRTYISSDKIQIFT-VNKKPYHVLKITLNKNEF 388
           I+  F     Y  Y+ ++ +  +  + K PY  +K  +NKNEF
Sbjct: 530 IFETFHKSNTYLMYLDANNLYGWAMIQKLPYDNIKFEMNKNEF 572


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,571,707
Number of Sequences: 27780
Number of extensions: 316674
Number of successful extensions: 723
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)