Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9m05
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094806-1|AAM11159.1|  325|Drosophila melanogaster LD27256p pro...    45   8e-05
AE013599-746|AAF59020.1|  325|Drosophila melanogaster CG8237-PA ...    45   8e-05

>AY094806-1|AAM11159.1|  325|Drosophila melanogaster LD27256p
           protein.
          Length = 325

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 23/180 (12%)
 Frame = +2

Query: 206 YFQALRIWIQQAQLYQN-LTCFPYYMVTFQGLQNHPTNVPLLNNN---------YXXXXX 355
           YF++L  W +QA L QN +  FPYY++      N+PT  P L ++               
Sbjct: 21  YFESLAEWAKQATLAQNAMLMFPYYLMA-----NYPTMFPGLPSSAALQAAAMGQPQALV 75

Query: 356 XXXXXVPNAPRIVPEA-AQQVASL------TPAEVIARHGGYEYIIPPLHKRLIAEFIDX 514
                 P  P   P   A   + L         ++I R GGYEY++ P  KR +AE ID 
Sbjct: 76  QGSAAAPGEPAAEPRLPAPNFSGLRILGEAAQLDIIQRLGGYEYVLSPFWKRAVAETIDM 135

Query: 515 XXXXXXXXXXXXXAVDTLEI-----IDTEKFDFQK-FSEYYDDYKSAIEFTSGILFLEIV 676
                         V+   I     +     D +  FS ++D     I  ++ +L +E++
Sbjct: 136 FILFIVKIIITFGVVNLFNIEFDEDVIRRTLDQEDLFSNFFDTSLDFISMSTDLLLIEML 195


>AE013599-746|AAF59020.1|  325|Drosophila melanogaster CG8237-PA
           protein.
          Length = 325

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 23/180 (12%)
 Frame = +2

Query: 206 YFQALRIWIQQAQLYQN-LTCFPYYMVTFQGLQNHPTNVPLLNNN---------YXXXXX 355
           YF++L  W +QA L QN +  FPYY++      N+PT  P L ++               
Sbjct: 21  YFESLAEWAKQATLAQNAMLMFPYYLMA-----NYPTMFPGLPSSAALQAAAMGQPQALV 75

Query: 356 XXXXXVPNAPRIVPEA-AQQVASL------TPAEVIARHGGYEYIIPPLHKRLIAEFIDX 514
                 P  P   P   A   + L         ++I R GGYEY++ P  KR +AE ID 
Sbjct: 76  QGSAAAPGEPAAEPRLPAPNFSGLRILGEAAQLDIIQRLGGYEYVLSPFWKRAVAETIDM 135

Query: 515 XXXXXXXXXXXXXAVDTLEI-----IDTEKFDFQK-FSEYYDDYKSAIEFTSGILFLEIV 676
                         V+   I     +     D +  FS ++D     I  ++ +L +E++
Sbjct: 136 FILFIVKIIITFGVVNLFNIEFDEDVIRRTLDQEDLFSNFFDTSLDFISMSTDLLLIEML 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,527,272
Number of Sequences: 53049
Number of extensions: 501889
Number of successful extensions: 981
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)