Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9l18
(743 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0177 + 1424773-1424850,1425307-1425391,1425498-1425577,142... 53 3e-07
04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 48 1e-05
01_05_0166 + 18844468-18845184,18847394-18847690 44 2e-04
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 40 0.003
09_02_0221 + 5962606-5963197,5963711-5963837,5963994-5964100,596... 38 0.008
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 36 0.026
03_02_0392 - 8070342-8071628 35 0.078
02_05_1285 - 35452249-35452604,35452702-35452789,35452908-354535... 34 0.10
08_02_0036 - 11455762-11455802,11455996-11456104,11456207-114568... 33 0.18
12_02_1111 - 26157796-26160330 33 0.32
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 31 0.97
12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702 30 1.7
11_06_0594 + 25349612-25352530 29 2.9
08_02_1011 - 23544917-23544964,23545334-23545822,23546661-235470... 29 3.9
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 29 3.9
01_06_1760 - 39697079-39697162,39697280-39697340,39697415-396974... 29 3.9
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 28 9.0
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 28 9.0
>03_01_0177 +
1424773-1424850,1425307-1425391,1425498-1425577,
1425771-1425898,1425962-1426049,1426187-1426277,
1426712-1426881,1427151-1427438,1427527-1427643,
1427924-1427976,1428029-1428090,1429042-1429118,
1429269-1429322,1429417-1429476,1429581-1429658,
1429805-1429851,1429933-1430051,1430280-1430364,
1430443-1430557,1430662-1430784,1430869-1430969,
1431346-1431475
Length = 742
Score = 52.8 bits (121), Expect = 3e-07
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 24/146 (16%)
Frame = +3
Query: 156 RMLEKMGWSSGKGLGAKENGIVEHVVARYKNDDRGLGYEDKNDQWTKHEDDFNSLLANLS 335
R++++MGW G+GLG + GI HV + K D G+G + +++W F+++L L
Sbjct: 21 RLMKQMGWEEGEGLGKDKQGIKGHVRVKNKQDTLGVGVDSPHNKWVYDTTQFDNILKKLK 80
Query: 336 ---NDN-GTEAKLHSGVSLEHKSKKSKAR--------------------VHYHKFTRGKD 443
DN A+ VS S +A+ Y K RGK
Sbjct: 81 VVLFDNIFGVAEFEDDVSNSPDSTPKEAKPTNNEVTKVTRPQGSLRNTYFRYKKRERGKS 140
Query: 444 LTQYSEKDLANIFGKKSLTNDDKPQE 521
++ YS KDL I +KS N QE
Sbjct: 141 VSGYSAKDLEGILVRKSDDNCKVDQE 166
>04_01_0082 +
897026-897028,897101-897350,898454-898608,898686-898967,
899078-899160,899335-899485,899896-899952,900279-900479
Length = 393
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +3
Query: 138 SGKFGQRMLEKMGWSSGKGLGAKENGIVEHVVARYKNDDRGLGYEDKNDQWTKHED 305
S G R+L+KMGW GKGLG E GI E + A ++ G+G ++++D +T ++
Sbjct: 61 SSNVGFRLLQKMGWK-GKGLGKNEQGITEPIKAGIRDAKLGVGKQEQDDFFTSEDN 115
>01_05_0166 + 18844468-18845184,18847394-18847690
Length = 337
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 153 QRMLEKMGWSSGKGLGAKENGIVEHVVARYKNDDRGLGYEDKN 281
QRM+ +MGW G+GLG +E GI +VA+ K D RG D+N
Sbjct: 172 QRMMARMGWKEGQGLGKQEQGITAPLVAK-KTDRRGGVIVDEN 213
>02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 135 DSGKFGQRMLEKMGWSSGKGLGAKENGIVEHVVARYKNDDRGLGYEDK 278
D G R+L MGW G GLG +GI E V A+ + GLG + +
Sbjct: 960 DESNVGNRILRNMGWQEGLGLGKTGSGIKEPVQAKSVDVRAGLGSQQR 1007
>09_02_0221 +
5962606-5963197,5963711-5963837,5963994-5964100,
5964185-5964328,5964700-5964822,5964921-5965103,
5965540-5965718,5965797-5965823
Length = 493
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 150 GQRMLEKMGWSSGKGLGAKENGIVEHVVA-RYKNDDRGLG 266
G ++L KMGW G+GLG++ +G + ++A K D G+G
Sbjct: 414 GHKLLSKMGWREGEGLGSERSGRADPIMAGDVKKDHLGVG 453
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 36.3 bits (80), Expect = 0.026
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 153 QRMLEKMGWSSGKGLGAKENGIVEHVVARYKNDDRGLGYE 272
++M+E MGW G+ LG G+VE + GLG++
Sbjct: 420 KKMMENMGWKEGEALGKSTKGMVEPIQPTVNKHGAGLGWK 459
>03_02_0392 - 8070342-8071628
Length = 428
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 147 FGQRMLEKMGWSSGKGLGAKENGIVEHVVARYKNDDRGLGY 269
FG +L GWS GKG+G G + V + +GLGY
Sbjct: 185 FGAALLAGYGWSEGKGIGRNNKGDTKVVEYDRRAGTQGLGY 225
>02_05_1285 -
35452249-35452604,35452702-35452789,35452908-35453588,
35453639-35453749,35454012-35454047
Length = 423
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 66 MLAGPRRKQKVINL-RAKNNAWSNDSGKFGQRMLEKMGWSSGKGLGAKENGIVEHVVARY 242
+LA +K +V+NL R +W+ + + G R + W S + G K + +V+ ++ +
Sbjct: 286 LLAPVLQKLRVLNLDRLPEGSWNGE--ELGYRDKTNVEWQSSQPDGFKHHNLVKLIIYGF 343
Query: 243 KNDDRGLGY 269
+ DD +GY
Sbjct: 344 QPDDNFVGY 352
>08_02_0036 -
11455762-11455802,11455996-11456104,11456207-11456854,
11457422-11457491,11458563-11458624,11458729-11458803,
11459423-11459514,11460233-11461466
Length = 776
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 147 FGQRMLEKMGWSSGKGLGAKENGIVEHVVARYKNDDRGLGYE 272
FG +M+ KMG+ G GLG G+++ + + GLG E
Sbjct: 613 FGSKMMAKMGFIEGTGLGKDGQGMMQPIQPIQRPKSLGLGVE 654
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 147 FGQRMLEKMGWSSGKGLGAKENGIVEHVVARYKNDD 254
FG +M+ +MG+ G GLG GIV + A + D+
Sbjct: 698 FGSKMMARMGFVEGSGLGKDGQGIVNPLTAPLEFDN 733
>12_02_1111 - 26157796-26160330
Length = 844
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 156 RMLEKMGWSSGKGLGAKENGIVEHVVARYKNDDRGLG 266
+M+ MG+ G GLG E GIV V + + GLG
Sbjct: 188 KMMAMMGYKDGMGLGKNEQGIVAPVETTLRPKNAGLG 224
>08_02_0095 -
12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 31.1 bits (67), Expect = 0.97
Identities = 29/103 (28%), Positives = 47/103 (45%)
Frame = +3
Query: 177 WSSGKGLGAKENGIVEHVVARYKNDDRGLGYEDKNDQWTKHEDDFNSLLANLSNDNGTEA 356
W SG G G N +HVV K+ G + +N + D +A + N+ G EA
Sbjct: 47 WDSGVGFGESPNN--DHVVPMNKDQLTPQGNKLRNHVTLPNHIDRTEKIAKMENEKG-EA 103
Query: 357 KLHSGVSLEHKSKKSKARVHYHKFTRGKDLTQYSEKDLANIFG 485
K + KS++++ KF GK++ S + L+N+ G
Sbjct: 104 KKKKKI-----CSKSESQLQ-RKFKEGKNVFGESTQ-LSNMLG 139
>12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702
Length = 501
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 264 GYEDKNDQWTKHEDDFNSLLANLSNDNGTEAKLHSGVSLEHKSKKSKARVHYHKFTRGKD 443
GY K +QWTK E++ + + T+ + GV+ + ++ S + + K R KD
Sbjct: 282 GYAPKVEQWTKEEEEMRKAGLPVPMEEWTQRSRNWGVADKIENLSSSQKKGFFKPKREKD 341
Query: 444 L 446
+
Sbjct: 342 V 342
>11_06_0594 + 25349612-25352530
Length = 972
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -2
Query: 184 ELHPIFSNIRCPNFPLSLLHALFLARKLITFCFRRGPAN 68
ELH FSN C PL L L A K++TFC+ P +
Sbjct: 419 ELHD-FSNSLCFCSPLHLSSWLSNAEKMLTFCYNALPCD 456
>08_02_1011 -
23544917-23544964,23545334-23545822,23546661-23547054,
23548707-23549104
Length = 442
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +3
Query: 126 WSNDS--GKF--GQRMLEKMGWSSGKGLGAKENGIVEHVVARYKNDDRGLGYEDKNDQWT 293
WS D+ GK G R KM ++ ++ + +K D G Y D+N ++
Sbjct: 372 WSGDTVKGKIFAGDRTATKMLAEEQADFQKRQEQELKFTASGWKRDGHGRWYRDENVEFD 431
Query: 294 KHEDDFNSLL 323
EDD N L
Sbjct: 432 SDEDDPNICL 441
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 126 WSNDSGKFGQRMLEKMGWSSGKGLGAKENGIVEHV 230
W + + +M+ KMG+ G GLG G+++ +
Sbjct: 300 WEHHTRGVASKMMAKMGYREGMGLGVSGQGMLDPI 334
>01_06_1760 -
39697079-39697162,39697280-39697340,39697415-39697479,
39697579-39697860,39697938-39698012,39698121-39698195,
39698343-39698399,39698653-39698726,39698912-39699055,
39699608-39699662,39700027-39700149,39700276-39700320,
39701068-39701160,39701249-39701662
Length = 548
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -1
Query: 299 MLRPLVILILVPQSSVIVLISRHYVLNNSVFFGTEPLPRTPSHFFQHTLPKFPAVIAPRV 120
+LR IL+L +S + S HYV N F T+P R H L A A R+
Sbjct: 454 LLRDPSILVLDEATSALDAESEHYVKNVITKFSTDPKARRTVIIIAHRLSTIQA--ADRI 511
Query: 119 I 117
I
Sbjct: 512 I 512
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 27.9 bits (59), Expect = 9.0
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +3
Query: 294 KHEDDFNSLLANLSNDNGTEAKLHSGVSLEHKSKKSKARVHYHKFTRGKD-LTQYSEKDL 470
K +D ++L +D+ + + ++LE S++ + V K + G D L + E+D
Sbjct: 1104 KPSEDSSALEEPPQDDSASVEPSENTITLEKASEEDEGSV---KPSEGNDALEKTLEEDE 1160
Query: 471 ANIFGKKSLTNDDKPQEKVQDNVKESDQKFTEKGSMEE 584
A+ + T +KP EK K+++ T + EE
Sbjct: 1161 ASAKLPEDSTTFEKPSEKDDAGTKQTEDPVTLEKEPEE 1198
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/87 (26%), Positives = 34/87 (39%)
Frame = +3
Query: 144 KFGQRMLEKMGWSSGKGLGAKENGIVEHVVARYKNDDRGLGYEDKNDQWTKHEDDFNSLL 323
KF + K + E +E A K DD +D +D + +DD ++
Sbjct: 359 KFAEETWAKHKDAEKAAFDEAEKKRLEEESANSKIDDSD---DDASDDEDEADDDKADVV 415
Query: 324 ANLSNDNGTEAKLHSGVSLEHKSKKSK 404
A + D G E VS + K K SK
Sbjct: 416 AEQTKDKGDEKPQDIKVSADEKPKSSK 442
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,985,654
Number of Sequences: 37544
Number of extensions: 384270
Number of successful extensions: 1214
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -