SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9l15
         (670 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...   186   2e-47
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803...   184   4e-47
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065...   184   6e-47
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629...   182   2e-46
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448...   167   7e-42
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760...   141   4e-34
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007...   132   2e-31
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593...    95   5e-20
05_01_0213 - 1606383-1606816,1607695-1608355                           31   0.83 
03_05_0469 + 24640925-24641081,24641292-24641644,24641870-246420...    31   0.83 
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310...    31   1.1  
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351...    29   2.5  
07_03_0941 - 22763733-22763970,22764077-22764213,22764282-227644...    29   2.5  
08_02_0839 + 21693348-21694853                                         29   4.4  
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458...    28   5.9  
07_03_0840 + 21935504-21936424,21936516-21938177                       28   5.9  
07_03_0839 + 21916842-21917852,21917944-21919602                       28   5.9  
12_02_0046 + 12830974-12832386                                         28   7.7  
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610...    28   7.7  
07_01_1093 + 10033403-10033984                                         28   7.7  
07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936           28   7.7  
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389...    28   7.7  
05_05_0149 - 22733703-22736216                                         28   7.7  
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324...    28   7.7  

>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score =  186 bits (452), Expect = 2e-47
 Identities = 91/130 (70%), Positives = 106/130 (81%)
 Frame = +2

Query: 281 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 460
           RE+NVY AKLAEQAERY+EMVE M+ VA + V   ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 227 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 285

Query: 461 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 640
           RIISSIEQKEE++G ED+  +I+ YR ++E EL  IC  IL +LD +L+PSS   ESKVF
Sbjct: 286 RIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVF 345

Query: 641 YYKMKGDYHR 670
           Y KMKGDY+R
Sbjct: 346 YLKMKGDYYR 355


>04_04_0141 +
           23079516-23079925,23080006-23080084,23080204-23080326,
           23081655-23081771,23081886-23081945
          Length = 262

 Score =  184 bits (449), Expect = 4e-47
 Identities = 90/130 (69%), Positives = 107/130 (82%)
 Frame = +2

Query: 281 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 460
           RE+NVY AKLAEQAERY+EMVE M+ VA + V   ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 9   REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 67

Query: 461 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 640
           RIISSIEQKEE++G ED++ +I+ YR ++E EL  IC  IL +L+ +L+PSS   ESKVF
Sbjct: 68  RIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVF 127

Query: 641 YYKMKGDYHR 670
           Y KMKGDY+R
Sbjct: 128 YLKMKGDYYR 137


>08_02_0753 -
           20805672-20805731,20805825-20805941,20806394-20806516,
           20806700-20806778,20806867-20807258
          Length = 256

 Score =  184 bits (448), Expect = 6e-47
 Identities = 90/130 (69%), Positives = 105/130 (80%)
 Frame = +2

Query: 281 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 460
           RE+NVY AKLAEQAERY+EMVE M+ VA + V   ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 3   REENVYMAKLAEQAERYEEMVEYMEKVA-KTVDVEELTVEERNLLSVAYKNVIGARRASW 61

Query: 461 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 640
           RI+SSIEQKEE +G E+ + +I+ YR ++E EL  IC  IL +LD +L+PSS   ESKVF
Sbjct: 62  RIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVF 121

Query: 641 YYKMKGDYHR 670
           Y KMKGDYHR
Sbjct: 122 YLKMKGDYHR 131


>03_05_0881 +
           28461857-28462263,28462357-28462435,28462798-28462920,
           28463632-28463748,28463861-28463917
          Length = 260

 Score =  182 bits (443), Expect = 2e-46
 Identities = 91/137 (66%), Positives = 107/137 (78%)
 Frame = +2

Query: 260 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 439
           +S   + RE+NVY AKLAEQAERY+EMVE M+ VA +     ELTVEERNLLSVAYKNVI
Sbjct: 1   MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVA-KTTDVGELTVEERNLLSVAYKNVI 59

Query: 440 GARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 619
           GARRASWRIISSIEQKEE++G E  +  I+ YRS++E EL  IC  IL +LD +L+PS+ 
Sbjct: 60  GARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSAT 119

Query: 620 TGESKVFYYKMKGDYHR 670
             ESKVFY KMKGDYHR
Sbjct: 120 AAESKVFYLKMKGDYHR 136


>08_02_1026 +
           23743186-23743686,23743793-23743915,23744734-23744850,
           23744948-23745001
          Length = 264

 Score =  167 bits (406), Expect = 7e-42
 Identities = 84/132 (63%), Positives = 103/132 (78%), Gaps = 2/132 (1%)
 Frame = +2

Query: 281 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDN--ELTVEERNLLSVAYKNVIGARRA 454
           RE+ VY AKLAEQAERY+EMVE M+ V +   +    ELTVEERNLLSVAYKNVIGARRA
Sbjct: 10  REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69

Query: 455 SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESK 634
           SWRI+SSIEQKEE +GA       R+YR++VE EL +IC+ IL +LD+ L+P++   ++K
Sbjct: 70  SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129

Query: 635 VFYYKMKGDYHR 670
           VFY KMKGDYHR
Sbjct: 130 VFYLKMKGDYHR 141


>11_06_0036 +
           19474848-19475188,19475696-19475774,19475880-19476002,
           19476970-19477086,19477169-19477228
          Length = 239

 Score =  141 bits (342), Expect = 4e-34
 Identities = 70/112 (62%), Positives = 81/112 (72%)
 Frame = +2

Query: 335 EMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDK 514
           E +E +   A       ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE +G +  
Sbjct: 3   EYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAH 62

Query: 515 LNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYHR 670
              IR+YR ++E EL  IC  IL +LD +L+PS+   ESKVFY KMKGDYHR
Sbjct: 63  AATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHR 114


>11_06_0360 -
           22699524-22699529,22699865-22699899,22700650-22700792,
           22701165-22701220,22701367-22701454,22702737-22703037,
           22704365-22704428
          Length = 230

 Score =  132 bits (320), Expect = 2e-31
 Identities = 68/133 (51%), Positives = 94/133 (70%)
 Frame = +2

Query: 272 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 451
           M ERE  V  AKLAEQAERYD+MVE MK +A  +V   +++ EER L SV +K  IGARR
Sbjct: 1   MKEREKVVRLAKLAEQAERYDDMVEFMKTLARMDV---DMSAEERLLFSVGFKKTIGARR 57

Query: 452 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGES 631
           ASWRI+ S+EQK  T G +  +  I  Y+ +VE ELR +C+++L ++  + +P + +GE+
Sbjct: 58  ASWRILESLEQKV-TAGDQPGVT-INGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGEN 115

Query: 632 KVFYYKMKGDYHR 670
            VF+YKMKGDY+R
Sbjct: 116 VVFFYKMKGDYYR 128


>01_01_0767 +
           5931031-5931281,5931414-5931594,5932020-5932129,
           5932212-5932360,5932686-5932738,5933168-5933260
          Length = 278

 Score = 95.1 bits (226), Expect = 5e-20
 Identities = 49/87 (56%), Positives = 60/87 (68%)
 Frame = +2

Query: 338 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKL 517
           MVEAM +VA     D  LT EERNLLSV YKN+IGA+RA+ RII SIE KEETKG E  +
Sbjct: 1   MVEAMNSVAKL---DEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHV 57

Query: 518 NMIRAYRSQVEKELRDICSDILGVLDK 598
                YR +VE E+  IC D++ ++DK
Sbjct: 58  RQTAEYRRKVEAEMDKICCDVINIIDK 84


>05_01_0213 - 1606383-1606816,1607695-1608355
          Length = 364

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 18/68 (26%), Positives = 28/68 (41%)
 Frame = +1

Query: 340 GGGDEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRNKRRRRQIE 519
           GGGD++ ++  +V+   + G     V RL   D  PP             R +RR R + 
Sbjct: 25  GGGDDDGAVVVQVQVQQEEGMSPCVVARLMGLDAMPPPPPETECQPLRRQRRRRRSRSVS 84

Query: 520 HDQSVPQP 543
             +  P P
Sbjct: 85  SAEGWPPP 92


>03_05_0469 +
           24640925-24641081,24641292-24641644,24641870-24642043,
           24642382-24642506,24643011-24643059,24643741-24643899,
           24644037-24644219
          Length = 399

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +2

Query: 368 RNVSDN-ELTVEERNLLSVAYKNVIGA-RRASWRIISSIE-QKEETKGAEDKLNMIRAYR 538
           R +SD  E  +E+ N  + AY+  +    + ++ I+S  + QKE  K  E++   ++A  
Sbjct: 181 RLLSDKMEKEIEDVNTDNKAYEACLQRLEQETYNILSETDFQKERQKVIEEEEKKLKAAI 240

Query: 539 SQVEKELRDICSDI 580
            + EK+  +ICS++
Sbjct: 241 EEAEKQYSEICSEM 254


>03_02_0834 -
           11630288-11630500,11630531-11630623,11630844-11631050,
           11631301-11633089,11633817-11634145
          Length = 876

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 278 EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVS-DNELTVEERNLLSVAYK 430
           +R  N +  KLAE       + E ++ +A +NVS   E+T+ E N + V+ K
Sbjct: 396 DRRSNDWSVKLAEFQSEEQRLRERVRELAEQNVSFQREVTLLESNRIDVSNK 447


>12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,
            3515033-3517110,3517649-3517976,3519136-3519255,
            3519299-3519352,3520115-3520154,3520344-3520411
          Length = 1088

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
 Frame = +2

Query: 272  MSEREDNVYKAKL------AEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKN 433
            + E ED V K K+      AE   + +  VEA+K      +      VE  N +  A +N
Sbjct: 678  VKELEDEVEKEKMRQEELVAELEMKMETAVEAIKESLEAQLCAANTEVERLNSIVQALEN 737

Query: 434  VIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLD 595
             I   +A   +   +  + E K  E+K   ++  +  +E +L    +++L + D
Sbjct: 738  DIEKEKA---LHKELTAQLEVKFEEEKARSVQTVKESMEAQLCSSNTEVLKLRD 788


>07_03_0941 -
           22763733-22763970,22764077-22764213,22764282-22764470,
           22765238-22765756,22766319-22767357,22767665-22767759,
           22768253-22768357
          Length = 773

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 530 AYRSQVEKELRDICSDILGVLD 595
           AY+SQ EK +R ICS++L + D
Sbjct: 28  AYQSQTEKGIRKICSELLELKD 49


>08_02_0839 + 21693348-21694853
          Length = 501

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 257 HLSSTMSEREDNVYKAKLAEQAERYDEMVEAMK 355
           HLS  M + E+   + K AE AE+ DE+V ++K
Sbjct: 235 HLSLVMEQEEEAEPEQKHAEAAEKADEVVVSVK 267


>08_01_0527 +
           4580599-4580818,4580933-4581806,4581891-4581955,
           4582055-4582110,4582955-4583058,4583310-4583382,
           4583474-4583654,4584537-4584622
          Length = 552

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 427 QERDRRPPRLLADHLLHRTEGRNKRRRRQIEHDQSVPQ 540
           Q+RD  PPR L+ H    ++  +  RRR   HD   PQ
Sbjct: 205 QQRDPSPPRRLSRHDSKESQDISPPRRR-TRHDSEEPQ 241


>07_03_0840 + 21935504-21936424,21936516-21938177
          Length = 860

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 600 YLSRT--PRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEEMIRQEARRAPITFL 427
           Y+SR   P  + Q    + +  LR + +   LS+APFV +F     +   +A RAP+ F+
Sbjct: 343 YISREKRPGYNHQKKAGAMNVMLRVSAL---LSNAPFVINFDGDHYVNNSQAFRAPMCFM 399


>07_03_0839 + 21916842-21917852,21917944-21919602
          Length = 889

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 600 YLSRT--PRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEEMIRQEARRAPITFL 427
           Y+SR   P  + Q    + +  LR + +   LS+APFV +F     +   +A RAP+ F+
Sbjct: 373 YISREKRPGYNHQKKAGAMNVMLRVSAL---LSNAPFVINFDGDHYVNNSQAFRAPMCFM 429


>12_02_0046 + 12830974-12832386
          Length = 470

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 410 GSSPPLSAHCRTRCVMLHSSSPPPFRHSAQPAQLTL 303
           G S P S   R  CV   +S+PPP R + QPA  +L
Sbjct: 217 GGSVPASKATRQSCVT--ASAPPPRRVAPQPAPPSL 250


>10_02_0167 -
           6100676-6102111,6102174-6102708,6102967-6103975,
           6104006-6105036
          Length = 1336

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 391 DSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRNKRRRRQIEHDQS 531
           D+ GE+P    L  +   PPR   D L  +  GR K RR + + ++S
Sbjct: 24  DANGEDPEQRELPRQATPPPRGTGD-LRDQINGRRKARRTRDDANRS 69


>07_01_1093 + 10033403-10033984
          Length = 193

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 406 EPAVGRLQERDRRPPRLLADHLLHRTEGRNKRRRRQIEH 522
           EPA  R+Q    R     A  L  R  GRN++R    EH
Sbjct: 52  EPARARIQRASGREAERPARRLTSRCRGRNRQRLTANEH 90


>07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936
          Length = 838

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 346 GDEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLA 462
           GDE   I +     A    EE A  RL+ R+ RPP ++A
Sbjct: 256 GDELDEIARACEAAAALSAEESAYRRLRRRESRPPLVIA 294


>07_01_0524 +
           3892340-3894625,3894995-3895109,3895204-3895298,
           3895929-3896167,3896524-3896610,3896967-3897066,
           3897908-3898115,3898224-3899422
          Length = 1442

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 356 NVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKG 502
           + A   +S+N+L + +RN++    K  +GA +  +   SS   K+   G
Sbjct: 537 DAACNAISENDLAMLQRNVVKRRTKKELGASKKKYEDSSSRNSKDNNAG 585


>05_05_0149 - 22733703-22736216
          Length = 837

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
 Frame = +2

Query: 278 EREDNVYKAKLAEQAERY-DEMVEAMKNVASRNVSDNELTVEERNL---LSVAYKNVIGA 445
           E    V    LA++ +R  +++++      S+N   N +  E  +L   L    +     
Sbjct: 303 ELHPGVSVTDLADKVDRLVEKVIDLELATTSQNAQINRMKTEIDDLHKCLQALEEEKSAL 362

Query: 446 RRASWRIISSIEQKEETKGAEDKL-NMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 619
              S +++  ++Q EE   A   L N I+     + KE+   CS++   ++K   P  Q
Sbjct: 363 VADSSKLVDRLKQVEEVLQAVQHLGNSIQNGTQNIHKEMNAACSELAEFVEKLHEPEPQ 421


>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
            3242494-3242836,3244138-3248540,3248928-3249107,
            3249108-3250892,3251055-3252173
          Length = 2727

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 22/87 (25%), Positives = 44/87 (50%)
 Frame = +2

Query: 305  KLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQ 484
            +L  + ER +EM+  M+N +S   S   L   E+++  + YK      ++S RI    E 
Sbjct: 1196 RLTLEIERLNEMLNDMENKSSEYKSTILLLNSEKDMSVIQYK------QSSLRI---YEL 1246

Query: 485  KEETKGAEDKLNMIRAYRSQVEKELRD 565
            + +  G +++L+        ++KEL++
Sbjct: 1247 ESKLSGVQEELDNAEQKVQMLDKELKE 1273


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,139,941
Number of Sequences: 37544
Number of extensions: 395414
Number of successful extensions: 1196
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -