Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9l14
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   1.4  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   5.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.6  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   7.6  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 524 QICAETFNRVERTLRAILHNAKLRSEDIH 610
           Q C  T N  + T   +L   +LR+EDI+
Sbjct: 157 QACPYTLNIFDLTSDKLLRQYRLRAEDIN 185


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/47 (19%), Positives = 20/47 (42%)
 Frame = +2

Query: 371 RKNQRAYLRLLQEVEKLKKQMSANSTRLPLNIECFMEERDVSGDMQR 511
           R+N  A+ R + +        ++++  LP+   C  E   +   + R
Sbjct: 340 RQNPAAFFRGMMQAWMTALGTASSAATLPITFRCLEENNKIDSRVTR 386


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 240 QAETCKEL*PKSTKTTFRGFSSAPGRS 160
           Q   CK++  +S ++ F G SS   R+
Sbjct: 3   QPNICKQILKRSAESEFEGASSPKKRN 29


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -3

Query: 236 LKPVKNCDQSRQRQHFVVSLQHQEDLVYKFHK 141
           L  + +C Q+  R +FV+   +  DL+Y+  +
Sbjct: 47  LVQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,054
Number of Sequences: 438
Number of extensions: 3150
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)