Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9l07
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97193-6|AAV34803.1| 780|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U97193-5|AAV34804.1| 783|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z75533-7|CAA99820.1| 285|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z54306-2|CAA91088.1| 260|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 29 3.7
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 29 3.7
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 29 3.7
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 29 3.7
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 29 3.7
U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid precur... 28 6.5
U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid precurs... 28 6.5
U55854-5|AAA98014.1| 103|Caenorhabditis elegans Hypothetical pr... 28 6.5
U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid pr... 28 6.5
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 28 6.5
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 28 6.5
AC084159-20|AAK39363.1| 315|Caenorhabditis elegans Hypothetical... 28 6.5
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 28 6.5
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 28 6.5
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 27 8.6
>U97193-6|AAV34803.1| 780|Caenorhabditis elegans Hypothetical
protein C06A5.3a protein.
Length = 780
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Frame = +2
Query: 110 YKSGDFIFAKVKGYPAWPARV----QRLNGKKYFVYFYGTGEIANLPPNMIFDYAENKDK 277
++ GD I+AK+KG+P WPA+V + ++ V F+GT E + + PN + DY N+
Sbjct: 13 FQPGDLIWAKMKGFPPWPAKVLERSEDAPARRIPVMFFGTLETSFMKPNDLSDYLPNR-L 71
Query: 278 FLTKTVKRRDFNDGVKQI 331
K++DFN V++I
Sbjct: 72 IHEIPRKQKDFNKAVQEI 89
>U97193-5|AAV34804.1| 783|Caenorhabditis elegans Hypothetical
protein C06A5.3b protein.
Length = 783
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Frame = +2
Query: 110 YKSGDFIFAKVKGYPAWPARV----QRLNGKKYFVYFYGTGEIANLPPNMIFDYAENKDK 277
++ GD I+AK+KG+P WPA+V + ++ V F+GT E + + PN + DY N+
Sbjct: 13 FQPGDLIWAKMKGFPPWPAKVLERSEDAPARRIPVMFFGTLETSFMKPNDLSDYLPNR-L 71
Query: 278 FLTKTVKRRDFNDGVKQI 331
K++DFN V++I
Sbjct: 72 IHEIPRKQKDFNKAVQEI 89
>Z75533-7|CAA99820.1| 285|Caenorhabditis elegans Hypothetical
protein C54G4.8 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 122 DFIFAKVKGYPAWPARVQRLNGKKYFVYFYGTGEIANLPPNMIFDYAENKD 274
D++F+ + GY PA V+ +GK Y YF G I ++P + + E KD
Sbjct: 161 DYVFSLLTGYLEAPAGVKVDDGKAYNPYF--PGGIISMPQQLFDEGIEYKD 209
>Z54306-2|CAA91088.1| 260|Caenorhabditis elegans Hypothetical
protein B0457.4 protein.
Length = 260
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 102 TFLPIFSITMPLPPCSMLSLHNTYSRQRSDGK 7
TFL + I PLPP +L H +S+ +D K
Sbjct: 203 TFLKHWKIESPLPPMDLLRDHEHFSKALADAK 234
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 515 DTAVEDSDDTGALVIDEGKPKGRKSKAESVKTPAKPVKEPK 637
D ED D+ LV + + + + AE KTPAK E K
Sbjct: 89 DLNAEDQDEIKKLVDELAEKRSKDGPAEPKKTPAKKKTEEK 129
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 254 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 346
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 254 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 346
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 254 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 346
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 254 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 346
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 254 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 346
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 254 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 346
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform a protein.
Length = 686
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 515 DTAVEDSDDTGALVIDEGKPKGRKSKAESVKTPAKPVKE 631
D +VEDS+ T ++ D+ K K ++ T AKPVKE
Sbjct: 451 DISVEDSELT-PIIHDDEFSKNAKLDVKAPTTTAKPVKE 488
>U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform b protein.
Length = 684
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 515 DTAVEDSDDTGALVIDEGKPKGRKSKAESVKTPAKPVKE 631
D +VEDS+ T ++ D+ K K ++ T AKPVKE
Sbjct: 451 DISVEDSELT-PIIHDDEFSKNAKLDVKAPTTTAKPVKE 488
>U55854-5|AAA98014.1| 103|Caenorhabditis elegans Hypothetical
protein C04G6.6 protein.
Length = 103
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 527 EDSDDTGALVIDEGKPKGRKSKAESVKTPAKPVKEPK 637
E DD+ + + G G+KSK + K P K +K PK
Sbjct: 5 ERDDDSSTVAVIRGA--GKKSKKTASKGPKKELKNPK 39
>U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid
protein precursor protein.
Length = 680
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 515 DTAVEDSDDTGALVIDEGKPKGRKSKAESVKTPAKPVKE 631
D +VEDS+ T ++ D+ K K ++ T AKPVKE
Sbjct: 445 DISVEDSELT-PIIHDDEFSKNAKLDVKAPTTTAKPVKE 482
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 310
+++ K+Y + F+ E NLP + +FD E+KD K R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 310
+++ K+Y + F+ E NLP + +FD E+KD K R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326
>AC084159-20|AAK39363.1| 315|Caenorhabditis elegans Hypothetical
protein Y73B3A.9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 500 NTLNNDTAVEDSDDTGALVIDEGKPKGRKSKAESVKTPAKPVKEP 634
+T N + +ED DD VIDE G ++++ +P P
Sbjct: 146 STANTNVLIEDDDDNVEKVIDESTKAGFIPSNSAIQSEFQPQSPP 190
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 310
+++ K+Y + F+ E NLP + +FD E+KD K R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 310
+++ K+Y + F+ E NLP + +FD E+KD K R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 527 EDSDDTGALVIDEGKPKGRKSKAESVKTPAK-PVKEPKTP 643
+D VI+E K RKS+ S + P+K P+ P+ P
Sbjct: 415 DDESGRSTPVIEEKKKPRRKSRKSSHQEPSKNPIPPPRIP 454
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 527 EDSDDTGALVIDEGKPKGRKSKAESVKTPAK-PVKEPKTP 643
+D VI+E K RKS+ S + P+K P+ P+ P
Sbjct: 415 DDESGRSTPVIEEKKKPRRKSRKSSHQEPSKNPIPPPRIP 454
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,445,634
Number of Sequences: 27780
Number of extensions: 258592
Number of successful extensions: 1001
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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