Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9l01
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           26   1.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.3  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   4.4  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    24   5.9  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    23   7.7  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   7.7  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 551 NGLIRFYTVKVSAGDKLVHSMDINEKNCVSVLKYHPSVAALFVYGTVT 694
           +G  R    + + G  +   MDI + N +  +++HPS+ A   YGT++
Sbjct: 149 SGPSRLIKDEYTPGSVVGGGMDI-DGNEIGTIQHHPSMVASGAYGTMS 195


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = -2

Query: 283 RIFYVFCRQILCRRGHR-*TVFVSNSLSCDGRFKEFCSLSAGAR 155
           RI Y FCR + C+   +    F +     D R K+   L A  R
Sbjct: 436 RILYCFCRNVECKELEKSYHTFGAQIADVDERIKQLDGLLASVR 479


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +2

Query: 332 EQLDENKENAYESSESDEDNE 394
           E+ +E++E+ YE  +++ED E
Sbjct: 481 EEDEEDEEDEYEGDDTEEDEE 501


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 275 LRLLSSNPL*ERSSMNRLCKQQFELRRPLQRI 180
           LR   ++PL    + N L ++ FE R P QR+
Sbjct: 99  LRFGRNDPLWTSFNENALLEENFEKRAPSQRL 130


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 642 TETQFFSLISM-LCTNLSPALTLTV*NLIKPLSVHQFSC 529
           T+  F ++++   C  L+P  + T+ N + PL++  + C
Sbjct: 150 TKPPFLNVVAKSTCIALTPTGSWTLRNCLNPLNIFPYIC 188


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +2

Query: 128 SVAVKKTEDASTGTQTTEFFEAAVATQTVAYKDGSSMT---SPTEDLTTKD 271
           SVA   T +AST T+     + A  T+     + ++ T   + TE+ TT +
Sbjct: 127 SVASPTTAEASTTTEAATTTQEATTTEEATTTEEATTTEKATTTEEATTTE 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,055
Number of Sequences: 2352
Number of extensions: 13956
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)