BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9k24
(639 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC056861-1|AAH56861.1| 380|Homo sapiens tumor suppressor candid... 138 2e-32
AF040707-1|AAC62535.1| 380|Homo sapiens candidate tumor suppres... 138 2e-32
AC002481-3|AAB67310.1| 380|Homo sapiens WUGSC:H_LUCA12.3 protein. 138 2e-32
BC021984-1|AAH21984.1| 380|Homo sapiens tumor suppressor candid... 134 3e-31
AJ583824-1|CAE47751.1| 1072|Homo sapiens ubiquitin specific prot... 32 2.0
AB037771-1|BAA92588.1| 911|Homo sapiens KIAA1350 protein protein. 32 2.0
BC101077-1|AAI01078.1| 1041|Homo sapiens toll-like receptor 8 pr... 31 4.6
BC101076-1|AAI01077.1| 1041|Homo sapiens toll-like receptor 8 pr... 31 4.6
BC101075-1|AAI01076.1| 1041|Homo sapiens toll-like receptor 8 pr... 31 4.6
BC101074-1|AAI01075.1| 1041|Homo sapiens toll-like receptor 8 pr... 31 4.6
AY358296-1|AAQ88663.1| 1041|Homo sapiens TLR8 protein. 31 4.6
AF246971-1|AAF64061.1| 1059|Homo sapiens Toll-like receptor 8 pr... 31 4.6
AF245703-1|AAF78036.1| 1041|Homo sapiens toll-like receptor 8 pr... 31 4.6
BC039703-1|AAH39703.1| 559|Homo sapiens DENN/MADD domain contai... 30 6.0
AL445489-2|CAI39792.1| 559|Homo sapiens DENN/MADD domain contai... 30 6.0
AL445489-1|CAI39791.1| 1009|Homo sapiens DENN/MADD domain contai... 30 6.0
AL390774-2|CAH73638.1| 559|Homo sapiens DENN/MADD domain contai... 30 6.0
AL390774-1|CAH73637.1| 1009|Homo sapiens DENN/MADD domain contai... 30 6.0
AL161790-2|CAI15706.1| 559|Homo sapiens DENN/MADD domain contai... 30 6.0
AL161790-1|CAI15705.1| 1009|Homo sapiens DENN/MADD domain contai... 30 6.0
AK024782-1|BAB15002.1| 559|Homo sapiens protein ( Homo sapiens ... 30 6.0
>BC056861-1|AAH56861.1| 380|Homo sapiens tumor suppressor candidate
4 protein.
Length = 380
Score = 138 bits (333), Expect = 2e-32
Identities = 60/119 (50%), Positives = 84/119 (70%)
Frame = +2
Query: 221 IRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVG 400
I CIF EFHP GPKI+ Q PED+IS+E+FD++ YII KP++Q +T+ A+ K++G
Sbjct: 7 IECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKLIG 66
Query: 401 YPIRIDNPRYERNVYLFNICFVCDSWSKTVQYEPVVKKLGEHLTIMEEETGFVSSGSSK 577
P+ I++ +Y RN LFN+ FVCD+ +KT EP+VKKL +LT +E E+ FVS SK
Sbjct: 67 CPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLTTLELESSFVSMEESK 125
>AF040707-1|AAC62535.1| 380|Homo sapiens candidate tumor suppressor
gene 21 protein isoform I protein.
Length = 380
Score = 138 bits (333), Expect = 2e-32
Identities = 60/119 (50%), Positives = 84/119 (70%)
Frame = +2
Query: 221 IRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVG 400
I CIF EFHP GPKI+ Q PED+IS+E+FD++ YII KP++Q +T+ A+ K++G
Sbjct: 7 IECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKLIG 66
Query: 401 YPIRIDNPRYERNVYLFNICFVCDSWSKTVQYEPVVKKLGEHLTIMEEETGFVSSGSSK 577
P+ I++ +Y RN LFN+ FVCD+ +KT EP+VKKL +LT +E E+ FVS SK
Sbjct: 67 CPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLTTLELESSFVSMEESK 125
>AC002481-3|AAB67310.1| 380|Homo sapiens WUGSC:H_LUCA12.3 protein.
Length = 380
Score = 138 bits (333), Expect = 2e-32
Identities = 60/119 (50%), Positives = 84/119 (70%)
Frame = +2
Query: 221 IRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVG 400
I CIF EFHP GPKI+ Q PED+IS+E+FD++ YII KP++Q +T+ A+ K++G
Sbjct: 7 IECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKLIG 66
Query: 401 YPIRIDNPRYERNVYLFNICFVCDSWSKTVQYEPVVKKLGEHLTIMEEETGFVSSGSSK 577
P+ I++ +Y RN LFN+ FVCD+ +KT EP+VKKL +LT +E E+ FVS SK
Sbjct: 67 CPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLTTLELESSFVSMEESK 125
>BC021984-1|AAH21984.1| 380|Homo sapiens tumor suppressor candidate
4 protein.
Length = 380
Score = 134 bits (323), Expect = 3e-31
Identities = 59/119 (49%), Positives = 83/119 (69%)
Frame = +2
Query: 221 IRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVG 400
I CIF EFH GPKI+ Q PED+IS+E+FD++ YII KP++Q +T+ A+ K++G
Sbjct: 7 IECIFFSEFHLTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKLIG 66
Query: 401 YPIRIDNPRYERNVYLFNICFVCDSWSKTVQYEPVVKKLGEHLTIMEEETGFVSSGSSK 577
P+ I++ +Y RN LFN+ FVCD+ +KT EP+VKKL +LT +E E+ FVS SK
Sbjct: 67 CPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLTTLELESSFVSMEESK 125
>AJ583824-1|CAE47751.1| 1072|Homo sapiens ubiquitin specific
proteinase 53 protein.
Length = 1072
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/94 (23%), Positives = 38/94 (40%)
Frame = +2
Query: 263 PKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVGYPIRIDNPRYERNV 442
P S Q P+D+ ++E + KP K + +N + G P +DN + V
Sbjct: 794 PSSSLQIPKDHNAREHIHQSDEQKLEKPNECKFSEWLNIENSERTGLPFHVDNSASGKRV 853
Query: 443 YLFNICFVCDSWSKTVQYEPVVKKLGEHLTIMEE 544
+ S +TV +P L + IM++
Sbjct: 854 NSNEPSSLWSSHLRTVGLKPETAPLIQQQNIMDQ 887
>AB037771-1|BAA92588.1| 911|Homo sapiens KIAA1350 protein protein.
Length = 911
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/94 (23%), Positives = 38/94 (40%)
Frame = +2
Query: 263 PKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVGYPIRIDNPRYERNV 442
P S Q P+D+ ++E + KP K + +N + G P +DN + V
Sbjct: 633 PSSSLQIPKDHNAREHIHQSDEQKLEKPNECKFSEWLNIENSERTGLPFHVDNSASGKRV 692
Query: 443 YLFNICFVCDSWSKTVQYEPVVKKLGEHLTIMEE 544
+ S +TV +P L + IM++
Sbjct: 693 NSNEPSSLWSSHLRTVGLKPETAPLIQQQNIMDQ 726
>BC101077-1|AAI01078.1| 1041|Homo sapiens toll-like receptor 8
protein.
Length = 1041
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -1
Query: 627 FL*VFRSCRRCASKVGSLDDPLDTNPVSSSIIVKCSPSFL-----TTGSYCTVLD 478
FL + SC CA + S P D + S+I +CS L T G Y T LD
Sbjct: 15 FLLISGSCELCAEENFSRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELD 69
>BC101076-1|AAI01077.1| 1041|Homo sapiens toll-like receptor 8
protein.
Length = 1041
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -1
Query: 627 FL*VFRSCRRCASKVGSLDDPLDTNPVSSSIIVKCSPSFL-----TTGSYCTVLD 478
FL + SC CA + S P D + S+I +CS L T G Y T LD
Sbjct: 15 FLLISGSCELCAEENFSRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELD 69
>BC101075-1|AAI01076.1| 1041|Homo sapiens toll-like receptor 8
protein.
Length = 1041
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -1
Query: 627 FL*VFRSCRRCASKVGSLDDPLDTNPVSSSIIVKCSPSFL-----TTGSYCTVLD 478
FL + SC CA + S P D + S+I +CS L T G Y T LD
Sbjct: 15 FLLISGSCELCAEENFSRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELD 69
>BC101074-1|AAI01075.1| 1041|Homo sapiens toll-like receptor 8
protein.
Length = 1041
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -1
Query: 627 FL*VFRSCRRCASKVGSLDDPLDTNPVSSSIIVKCSPSFL-----TTGSYCTVLD 478
FL + SC CA + S P D + S+I +CS L T G Y T LD
Sbjct: 15 FLLISGSCELCAEENFSRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELD 69
>AY358296-1|AAQ88663.1| 1041|Homo sapiens TLR8 protein.
Length = 1041
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -1
Query: 627 FL*VFRSCRRCASKVGSLDDPLDTNPVSSSIIVKCSPSFL-----TTGSYCTVLD 478
FL + SC CA + S P D + S+I +CS L T G Y T LD
Sbjct: 15 FLLISGSCELCAEENFSRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELD 69
>AF246971-1|AAF64061.1| 1059|Homo sapiens Toll-like receptor 8
protein.
Length = 1059
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -1
Query: 627 FL*VFRSCRRCASKVGSLDDPLDTNPVSSSIIVKCSPSFL-----TTGSYCTVLD 478
FL + SC CA + S P D + S+I +CS L T G Y T LD
Sbjct: 33 FLLISGSCELCAEENFSRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELD 87
>AF245703-1|AAF78036.1| 1041|Homo sapiens toll-like receptor 8
protein.
Length = 1041
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -1
Query: 627 FL*VFRSCRRCASKVGSLDDPLDTNPVSSSIIVKCSPSFL-----TTGSYCTVLD 478
FL + SC CA + S P D + S+I +CS L T G Y T LD
Sbjct: 15 FLLISGSCELCAEENFSRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELD 69
>BC039703-1|AAH39703.1| 559|Homo sapiens DENN/MADD domain
containing 1A protein.
Length = 559
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 254 VAGPKISCQFPEDYISKEVFDSISAYIIP 340
++ P++ QFPEDY +EV +++ + P
Sbjct: 28 LSDPEVQRQFPEDYSDQEVLQTLTKFCFP 56
>AL445489-2|CAI39792.1| 559|Homo sapiens DENN/MADD domain
containing 1A protein.
Length = 559
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 254 VAGPKISCQFPEDYISKEVFDSISAYIIP 340
++ P++ QFPEDY +EV +++ + P
Sbjct: 28 LSDPEVQRQFPEDYSDQEVLQTLTKFCFP 56
>AL445489-1|CAI39791.1| 1009|Homo sapiens DENN/MADD domain
containing 1A protein.
Length = 1009
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 254 VAGPKISCQFPEDYISKEVFDSISAYIIP 340
++ P++ QFPEDY +EV +++ + P
Sbjct: 28 LSDPEVQRQFPEDYSDQEVLQTLTKFCFP 56
>AL390774-2|CAH73638.1| 559|Homo sapiens DENN/MADD domain
containing 1A protein.
Length = 559
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 254 VAGPKISCQFPEDYISKEVFDSISAYIIP 340
++ P++ QFPEDY +EV +++ + P
Sbjct: 28 LSDPEVQRQFPEDYSDQEVLQTLTKFCFP 56
>AL390774-1|CAH73637.1| 1009|Homo sapiens DENN/MADD domain
containing 1A protein.
Length = 1009
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 254 VAGPKISCQFPEDYISKEVFDSISAYIIP 340
++ P++ QFPEDY +EV +++ + P
Sbjct: 28 LSDPEVQRQFPEDYSDQEVLQTLTKFCFP 56
>AL161790-2|CAI15706.1| 559|Homo sapiens DENN/MADD domain
containing 1A protein.
Length = 559
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 254 VAGPKISCQFPEDYISKEVFDSISAYIIP 340
++ P++ QFPEDY +EV +++ + P
Sbjct: 28 LSDPEVQRQFPEDYSDQEVLQTLTKFCFP 56
>AL161790-1|CAI15705.1| 1009|Homo sapiens DENN/MADD domain
containing 1A protein.
Length = 1009
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 254 VAGPKISCQFPEDYISKEVFDSISAYIIP 340
++ P++ QFPEDY +EV +++ + P
Sbjct: 28 LSDPEVQRQFPEDYSDQEVLQTLTKFCFP 56
>AK024782-1|BAB15002.1| 559|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21129 fis, clone CAS06266. ).
Length = 559
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 254 VAGPKISCQFPEDYISKEVFDSISAYIIP 340
++ P++ QFPEDY +EV +++ + P
Sbjct: 28 LSDPEVQRQFPEDYSDQEVLQTLTKFCFP 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,509,444
Number of Sequences: 237096
Number of extensions: 2339843
Number of successful extensions: 4779
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4779
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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