BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9k24
(639 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051914-1|AAK93338.1| 412|Drosophila melanogaster LD40282p pro... 169 3e-42
AE014298-2495|AAF48677.1| 412|Drosophila melanogaster CG9104-PA... 169 3e-42
AE014134-1826|AAF52902.1| 460|Drosophila melanogaster CG13138-P... 31 1.7
AE014134-1825|AAN10742.1| 549|Drosophila melanogaster CG13138-P... 31 1.7
BT021957-1|AAX51662.1| 388|Drosophila melanogaster AT05371p pro... 29 7.0
AY060246-1|AAL25285.1| 136|Drosophila melanogaster GH06646p pro... 29 7.0
AE014298-2549|AAF48717.1| 347|Drosophila melanogaster CG12996-P... 29 7.0
AE014134-947|AAN10549.1| 388|Drosophila melanogaster CG14011-PC... 29 7.0
AE014134-946|AAN10548.1| 388|Drosophila melanogaster CG14011-PB... 29 7.0
AE014134-945|AAF52270.1| 388|Drosophila melanogaster CG14011-PA... 29 7.0
AY052056-1|AAK93480.1| 1218|Drosophila melanogaster LP08452p pro... 28 9.3
AE014296-1730|AAN11956.2| 1218|Drosophila melanogaster CG32046-P... 28 9.3
AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-P... 28 9.3
>AY051914-1|AAK93338.1| 412|Drosophila melanogaster LD40282p
protein.
Length = 412
Score = 169 bits (411), Expect = 3e-42
Identities = 76/123 (61%), Positives = 97/123 (78%), Gaps = 1/123 (0%)
Frame = +2
Query: 212 EGPIRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHK 391
EG IRCIFL EFH AG KISCQ P++YISK+VFD+I+ YIIPK +Q+C +T+NA+ K
Sbjct: 37 EGKIRCIFLSEFHATAGCKISCQVPDNYISKDVFDAINVYIIPKQHLQRCILTVNAMDVK 96
Query: 392 IVGYPIRI-DNPRYERNVYLFNICFVCDSWSKTVQYEPVVKKLGEHLTIMEEETGFVSSG 568
IVGYP+ I D +Y RN +LFN+CFVCDS +++VQYEPVVKKL E+L +MEEE+ F+S
Sbjct: 97 IVGYPVGIQDQQKYARNAFLFNLCFVCDSRARSVQYEPVVKKLSEYLIMMEEESCFLSRE 156
Query: 569 SSK 577
K
Sbjct: 157 DDK 159
>AE014298-2495|AAF48677.1| 412|Drosophila melanogaster CG9104-PA
protein.
Length = 412
Score = 169 bits (411), Expect = 3e-42
Identities = 76/123 (61%), Positives = 97/123 (78%), Gaps = 1/123 (0%)
Frame = +2
Query: 212 EGPIRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHK 391
EG IRCIFL EFH AG KISCQ P++YISK+VFD+I+ YIIPK +Q+C +T+NA+ K
Sbjct: 37 EGKIRCIFLSEFHATAGCKISCQVPDNYISKDVFDAINVYIIPKQHLQRCILTVNAMDVK 96
Query: 392 IVGYPIRI-DNPRYERNVYLFNICFVCDSWSKTVQYEPVVKKLGEHLTIMEEETGFVSSG 568
IVGYP+ I D +Y RN +LFN+CFVCDS +++VQYEPVVKKL E+L +MEEE+ F+S
Sbjct: 97 IVGYPVGIQDQQKYARNAFLFNLCFVCDSRARSVQYEPVVKKLSEYLIMMEEESCFLSRE 156
Query: 569 SSK 577
K
Sbjct: 157 DDK 159
>AE014134-1826|AAF52902.1| 460|Drosophila melanogaster CG13138-PA,
isoform A protein.
Length = 460
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 254 VAGPKISCQFPEDYISKEVFDS-ISAYIIPKPQIQKCTMTINALGHKIVGYP 406
V I QF DY++K FDS + +PK I+ + + + K+VG P
Sbjct: 334 VTKSSIDPQFKHDYVTKSSFDSQYNQEYVPKTSIESTSPGRDGVSLKLVGPP 385
>AE014134-1825|AAN10742.1| 549|Drosophila melanogaster CG13138-PB,
isoform B protein.
Length = 549
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 254 VAGPKISCQFPEDYISKEVFDS-ISAYIIPKPQIQKCTMTINALGHKIVGYP 406
V I QF DY++K FDS + +PK I+ + + + K+VG P
Sbjct: 423 VTKSSIDPQFKHDYVTKSSFDSQYNQEYVPKTSIESTSPGRDGVSLKLVGPP 474
>BT021957-1|AAX51662.1| 388|Drosophila melanogaster AT05371p
protein.
Length = 388
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 478 PTITYKADIEEVHITFISGVVYANWI 401
P +TY IE +HI +G Y NW+
Sbjct: 209 PPLTYTRRIEPLHIRRSAGEAYENWL 234
>AY060246-1|AAL25285.1| 136|Drosophila melanogaster GH06646p
protein.
Length = 136
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 432 NVMCTSSISALYVIVGPRQCSMSLLS 509
N++C S A V+VG CS++LLS
Sbjct: 24 NILCAHSFFARSVVVGVPDCSINLLS 49
>AE014298-2549|AAF48717.1| 347|Drosophila melanogaster CG12996-PA
protein.
Length = 347
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 35 RYCLTIVFSSKCNSEL*QMQVQRRSKAS-TRRDFDGSLEPNLDLVS 169
R+C + SKCNSE R S+ S R+ DG P+ DL S
Sbjct: 258 RFCENSLCGSKCNSER-GSHASRMSRISQISRNLDGGYPPDPDLES 302
>AE014134-947|AAN10549.1| 388|Drosophila melanogaster CG14011-PC,
isoform C protein.
Length = 388
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 478 PTITYKADIEEVHITFISGVVYANWI 401
P +TY IE +HI +G Y NW+
Sbjct: 209 PPLTYTRRIEPLHIRRSAGEAYENWL 234
>AE014134-946|AAN10548.1| 388|Drosophila melanogaster CG14011-PB,
isoform B protein.
Length = 388
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 478 PTITYKADIEEVHITFISGVVYANWI 401
P +TY IE +HI +G Y NW+
Sbjct: 209 PPLTYTRRIEPLHIRRSAGEAYENWL 234
>AE014134-945|AAF52270.1| 388|Drosophila melanogaster CG14011-PA,
isoform A protein.
Length = 388
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 478 PTITYKADIEEVHITFISGVVYANWI 401
P +TY IE +HI +G Y NW+
Sbjct: 209 PPLTYTRRIEPLHIRRSAGEAYENWL 234
>AY052056-1|AAK93480.1| 1218|Drosophila melanogaster LP08452p
protein.
Length = 1218
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 23 TITRRYCLTIVFSSKCNSEL*QMQVQRRSKASTRRDFDGSLEPNLD 160
T +R++ LT V + L Q V++ + STRR F GS E + D
Sbjct: 387 TSSRQHPLTSVHVQPQSRHLDQKSVKQLTNNSTRRGFSGSREISAD 432
>AE014296-1730|AAN11956.2| 1218|Drosophila melanogaster CG32046-PB,
isoform B protein.
Length = 1218
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 23 TITRRYCLTIVFSSKCNSEL*QMQVQRRSKASTRRDFDGSLEPNLD 160
T +R++ LT V + L Q V++ + STRR F GS E + D
Sbjct: 387 TSSRQHPLTSVHVQPQSRHLDQKSVKQLTNNSTRRGFSGSREISAD 432
>AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-PA,
isoform A protein.
Length = 1392
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 23 TITRRYCLTIVFSSKCNSEL*QMQVQRRSKASTRRDFDGSLEPNLD 160
T +R++ LT V + L Q V++ + STRR F GS E + D
Sbjct: 387 TSSRQHPLTSVHVQPQSRHLDQKSVKQLTNNSTRRGFSGSREISAD 432
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,058,189
Number of Sequences: 53049
Number of extensions: 700672
Number of successful extensions: 1774
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1772
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -