Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9k24
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61949-9|AAB03156.3| 433|Caenorhabditis elegans Hypothetical pr... 67 9e-12
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 3.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 3.7
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 27 8.6
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 27 8.6
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 8.6
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 27 8.6
U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein. 27 8.6
L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 27 8.6
AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical ... 27 8.6
>U61949-9|AAB03156.3| 433|Caenorhabditis elegans Hypothetical
protein F49E8.1 protein.
Length = 433
Score = 67.3 bits (157), Expect = 9e-12
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Frame = +2
Query: 230 IFLGEFHPVAGPKISCQFPEDYISKEV-FDSISAYIIPKPQI--QKCTMTINALGHKIVG 400
I L EFH G I P++ E F IIPKP + ++TI +L K++
Sbjct: 40 ILLAEFHNTLGAIIKHSVPKENNKVEATFHFTKGLIIPKPSMFRNSFSLTIKSLRCKVLM 99
Query: 401 YPIRIDNPRYERNVYLFNICFVCDSWSKT-VQYEPVVKKLGEHLTIMEEETGFVSSGSSK 577
+P+ ID+ YER + F++ F+ D S YEP+V+K E+L +E E F+++ K
Sbjct: 100 FPVGIDHKSYERGRFTFDMAFIVDMTSSAETMYEPIVQKCAEYLIELEMEYKFLTNPKYK 159
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 211 GRPNSMYIPRGIPPCRRPKDFMPVPG 288
G P + PRG PP P +MP PG
Sbjct: 154 GMPGAYPPPRGYPPAPAPGVYMPPPG 179
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 211 GRPNSMYIPRGIPPCRRPKDFMPVPG 288
G P + PRG PP P +MP PG
Sbjct: 154 GMPGAYPPPRGYPPAPAPGVYMPPPG 179
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 281 FPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVGYPIRIDNPRYE 433
F +D I + D I I+PK +I K I A K P+R+DNP Y+
Sbjct: 4700 FDQDEIELKTADEI---IVPKAEISK--PPIPARPKKEKADPLRVDNPLYD 4745
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 281 FPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVGYPIRIDNPRYE 433
F +D I + D I I+PK +I K I A K P+R+DNP Y+
Sbjct: 4700 FDQDEIELKTADEI---IVPKAEISK--PPIPARPKKEKADPLRVDNPLYD 4745
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 344 PQIQKCTMTINALGHKIVGYPIRIDNPRYERNVYLFNICFVCDSWSKTVQYE 499
P+IQK + + HKI+ + D + + + C +CD W KT ++
Sbjct: 1145 PEIQKM-LNVLLCDHKIIKGTLN-DKAFVDEYYWKEHSCLICDFWCKTYSFK 1194
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 60 LQNATVNYSKCKYRDVRRHRRGGTLMVV 143
L++ + S+ +YRD+ HR GGT M V
Sbjct: 193 LKDVNMWMSQGEYRDIPHHRTGGTAMHV 220
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 60 LQNATVNYSKCKYRDVRRHRRGGTLMVV 143
L++ + S+ +YRD+ HR GGT M V
Sbjct: 193 LKDVNMWMSQGEYRDIPHHRTGGTAMHV 220
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 60 LQNATVNYSKCKYRDVRRHRRGGTLMVV 143
L++ + S+ +YRD+ HR GGT M V
Sbjct: 193 LKDVNMWMSQGEYRDIPHHRTGGTAMHV 220
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 60 LQNATVNYSKCKYRDVRRHRRGGTLMVV 143
L++ + S+ +YRD+ HR GGT M V
Sbjct: 193 LKDVNMWMSQGEYRDIPHHRTGGTAMHV 220
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 60 LQNATVNYSKCKYRDVRRHRRGGTLMVV 143
L++ + S+ +YRD+ HR GGT M V
Sbjct: 193 LKDVNMWMSQGEYRDIPHHRTGGTAMHV 220
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 60 LQNATVNYSKCKYRDVRRHRRGGTLMVV 143
L++ + S+ +YRD+ HR GGT M V
Sbjct: 193 LKDVNMWMSQGEYRDIPHHRTGGTAMHV 220
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 60 LQNATVNYSKCKYRDVRRHRRGGTLMVV 143
L++ + S+ +YRD+ HR GGT M V
Sbjct: 193 LKDVNMWMSQGEYRDIPHHRTGGTAMHV 220
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 60 LQNATVNYSKCKYRDVRRHRRGGTLMVV 143
L++ + S+ +YRD+ HR GGT M V
Sbjct: 193 LKDVNMWMSQGEYRDIPHHRTGGTAMHV 220
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 60 LQNATVNYSKCKYRDVRRHRRGGTLMVV 143
L++ + S+ +YRD+ HR GGT M V
Sbjct: 193 LKDVNMWMSQGEYRDIPHHRTGGTAMHV 220
>U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein.
Length = 846
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 120 VDAFERLCTCICYSSLLHFEEKTIVKQ 40
V++FE+ C C L HF + I+KQ
Sbjct: 269 VNSFEQFCINFCNEKLQHFFNERILKQ 295
>L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical
protein ZK686.4 protein.
Length = 217
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 564 LDTNPVSSSIIVKCSPSFLTTGSYCTVLD 478
LD+ S +I K +PS T G YC V D
Sbjct: 68 LDSKVGKSVVITKATPSAETGGFYCDVCD 96
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 120 VDAFERLCTCICYSSLLHFEEKTIVKQ 40
V++FE+ C C L HF + I+KQ
Sbjct: 471 VNSFEQFCINFCNEKLQHFFNERILKQ 497
>AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2b protein.
Length = 700
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 259 RPKDFMPVPGRLYF--KRSFRFNKCIHHS*TTNTKMHYD 369
+PKDF P + + S F++ IH TT +HY+
Sbjct: 132 KPKDFFSTPKKRIVCNRNSVDFDENIHEEVTTRDALHYE 170
>AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2a protein.
Length = 741
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 259 RPKDFMPVPGRLYF--KRSFRFNKCIHHS*TTNTKMHYD 369
+PKDF P + + S F++ IH TT +HY+
Sbjct: 173 KPKDFFSTPKKRIVCNRNSVDFDENIHEEVTTRDALHYE 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,086,946
Number of Sequences: 27780
Number of extensions: 372226
Number of successful extensions: 846
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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