Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9k24
(639 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 27 0.20
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 27 0.20
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 27 0.20
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 27 0.20
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.35
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 1.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.1
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 3.3
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 22 4.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 7.6
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 7.6
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 26.6 bits (56), Expect = 0.20
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 165 TKSKFGSKLPSKSLL--VDAFERLCTCICYSSLLHF 64
T + F S LP S L ++ ++ +C C Y+SLL F
Sbjct: 346 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEF 381
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 26.6 bits (56), Expect = 0.20
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 165 TKSKFGSKLPSKSLL--VDAFERLCTCICYSSLLHF 64
T + F S LP S L ++ ++ +C C Y+SLL F
Sbjct: 315 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEF 350
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 26.6 bits (56), Expect = 0.20
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 165 TKSKFGSKLPSKSLL--VDAFERLCTCICYSSLLHF 64
T + F S LP S L ++ ++ +C C Y+SLL F
Sbjct: 366 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEF 401
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 26.6 bits (56), Expect = 0.20
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 165 TKSKFGSKLPSKSLL--VDAFERLCTCICYSSLLHF 64
T + F S LP S L ++ ++ +C C Y+SLL F
Sbjct: 315 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEF 350
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.35
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = -1
Query: 189 LVSIILLDTK-SKFGSKLPSKSLL--VDAFERLCTCICYSSLLHF 64
+ S++ L T+ +K + LP S L VDAF +CT + +L+ +
Sbjct: 281 VTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMALMEY 325
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 416 DNPRYERNVYLFNICFVCDSWSKTVQYEPVVKKLGEHLTIMEE 544
D +Y R V F +CFVC + + Y + + + L ++EE
Sbjct: 403 DIDKYSRIV--FPVCFVCFNLMYWIIYLHISDVVADDLVLLEE 443
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 416 DNPRYERNVYLFNICFVCDSWSKTVQYEPVVKKLGEHLTIMEE 544
D +Y R V F +CFVC + + Y + + + L ++EE
Sbjct: 403 DIDKYSRIV--FPVCFVCFNLMYWIIYLHISDVVADDLVLLEE 443
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 68 CNSEL*QMQVQRRSKASTRRDFDGSLEPNLDLVSSKIMETRYYEGCGR 211
C EL Q Q + A RR+ S P+LDL +E ++ GR
Sbjct: 351 CKPELGQSQSSPKFVA--RREESNSSSPSLDLGKEGGLEAQWSRVLGR 396
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +3
Query: 72 TVNYSKCKYRDVRRHRRGGT 131
++N+S C R + + R+GG+
Sbjct: 75 SINHSACAIRCLAQRRKGGS 94
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +2
Query: 407 IRIDNPRYERNVYLFNICFVCDSWSKTVQYEPVVKK 514
+R+ +P + N+ +C+ CD KT+ + +K+
Sbjct: 355 MRLSHPLHG-NLLPPGVCYTCDVCGKTLSTKLTLKR 389
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = -3
Query: 472 ITYKADIEEVHITFISGVVYANWIPNNFVP*CIYGHSAFL 353
+T+K + I +G+V A + C++GH+ L
Sbjct: 574 LTHKGKPIRMRIGIHTGMVLAGVVGKKMPRYCLFGHNVTL 613
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,213
Number of Sequences: 438
Number of extensions: 4799
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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