Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9k23
         (490 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79756-10|CAL36507.1|   80|Caenorhabditis elegans Hypothetical p...    36   0.012
U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    33   0.11 
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p...    27   5.5  
U29244-9|AAN60507.1|  681|Caenorhabditis elegans Eps15 (endocyto...    27   5.5  
U29244-8|AAC71084.1|  751|Caenorhabditis elegans Eps15 (endocyto...    27   5.5  
AY027560-1|AAK13051.1|  796|Caenorhabditis elegans EHS-1 protein.      27   5.5  
U80846-2|AAC70887.3|  516|Caenorhabditis elegans Hypothetical pr...    27   7.3  
U28732-7|AAB04899.1|  114|Caenorhabditis elegans Hypothetical pr...    27   7.3  
AF003148-5|AAB54209.3|  792|Caenorhabditis elegans Hypothetical ...    27   7.3  
Z81556-7|CAB04519.1|  569|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z49909-6|CAA90109.1|  214|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    27   9.7  
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    27   9.7  
AY303579-1|AAP57301.1|  214|Caenorhabditis elegans cell death-re...    27   9.7  
AF067942-7|AAG45571.2|  200|Caenorhabditis elegans Hypothetical ...    27   9.7  
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat...    27   9.7  

>Z79756-10|CAL36507.1|   80|Caenorhabditis elegans Hypothetical
           protein F53C11.9 protein.
          Length = 80

 Score = 36.3 bits (80), Expect = 0.012
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 141 DANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDAC 284
           D  +   RTC+NP    M      +RC+C    V+D  T  C+DL  C
Sbjct: 31  DCGSPCDRTCENPN--PMCIQMCKARCECKQGFVVDSNTKKCIDLKKC 76


>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 33.1 bits (72), Expect = 0.11
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +3

Query: 165 TCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDAC 284
           TCDN    E    C  + C C   LV D  TG CV+ + C
Sbjct: 93  TCDNENP-ECDLVCMTNVCQCKKGLVRDSATGKCVEKNKC 131


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
            ZK783.1 protein.
          Length = 2585

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = +3

Query: 87   KRCVSYCPRLMHPYHTRCDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLC 266
            K+C +   R        C    +   +C + +IY    +   S C+C      ++E+  C
Sbjct: 1662 KKCTNPLERSCEDVEKFC--GRVDHVSCLSVRIYNGSLS---SVCECEPGFRFEKESNSC 1716

Query: 267  VDLDACQ 287
            VD+D C+
Sbjct: 1717 VDIDECE 1723


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
            F55H12.3 protein.
          Length = 2972

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
 Frame = +3

Query: 117  MHPYHT-RCDANTISQRTCDN--PQIYEMGYTCGWSRCDCNGD---LVLDEETGLCVDLD 278
            + PY T  CD  T      D   P  Y + +  G+  C C+     ++LD   G CVD D
Sbjct: 854  IQPYDTFECDCTT-DPNFIDPCLPHGYYVQHN-GFYSCQCDVGYKYVLLDSNVGKCVDRD 911

Query: 279  ACQLKN 296
             C+ K+
Sbjct: 912  ECEEKS 917


>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
           protein C39D10.7 protein.
          Length = 1185

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +3

Query: 198 YTCGWSRC---DCNGDLVLDEETGLCVDLDACQ 287
           +TC   R    DC GDLV ++ TG C   + C+
Sbjct: 451 FTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483


>U29244-9|AAN60507.1|  681|Caenorhabditis elegans Eps15 (endocytosis
           protein) homologoussequence protein 1, isoform b
           protein.
          Length = 681

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 205 VDGLDVIAMVIWY*TKKQDFVLTWTLANLKMSNLKNLNQESLT 333
           VDG+D+ A ++      Q     W LA++K     NL Q +LT
Sbjct: 313 VDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALT 355


>U29244-8|AAC71084.1|  751|Caenorhabditis elegans Eps15 (endocytosis
           protein) homologoussequence protein 1, isoform a
           protein.
          Length = 751

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 205 VDGLDVIAMVIWY*TKKQDFVLTWTLANLKMSNLKNLNQESLT 333
           VDG+D+ A ++      Q     W LA++K     NL Q +LT
Sbjct: 313 VDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALT 355


>AY027560-1|AAK13051.1|  796|Caenorhabditis elegans EHS-1 protein.
          Length = 796

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 205 VDGLDVIAMVIWY*TKKQDFVLTWTLANLKMSNLKNLNQESLT 333
           VDG+D+ A ++      Q     W LA++K     NL Q +LT
Sbjct: 358 VDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALT 400


>U80846-2|AAC70887.3|  516|Caenorhabditis elegans Hypothetical
           protein K06A9.2 protein.
          Length = 516

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 135 RCDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 296
           R  A+ +    C  P    + Y  G ++   +G++V + +  +C+DLD   LKN
Sbjct: 378 RTGASLVDSSMCLTPDNKYL-YVTGTTKRSVDGEIVFEVKP-ICLDLDTMVLKN 429


>U28732-7|AAB04899.1|  114|Caenorhabditis elegans Hypothetical
           protein F45E1.2 protein.
          Length = 114

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 489 FFFLINYFYYISQKHIFFLIL 427
           FF L  Y+YY S KH + + L
Sbjct: 88  FFLLSYYYYYFSYKHAYSVFL 108


>AF003148-5|AAB54209.3|  792|Caenorhabditis elegans Hypothetical
           protein F32B5.7 protein.
          Length = 792

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -2

Query: 252 LRLVPNHHCNHI*TIHMYNPFRKFVDCRKSFEKLCSHHIL-CDTDASNVDSTIR 94
           L ++P    + +   HM +P     DC K   K+  H +L  D      DS++R
Sbjct: 108 LNVIPPLDVHWVWHTHMLSPIHYQEDCEKLVGKIIDHKLLSSDEIQKRYDSSVR 161


>Z81556-7|CAB04519.1|  569|Caenorhabditis elegans Hypothetical
           protein F58G1.7 protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 212 PSTCITHFVNLWIVASPLRNCVRITSCV 129
           PS  I+ +  L  ++ PLR+ + IT C+
Sbjct: 109 PSPSISMYYQLRFLSKPLRSIITITQCI 136


>Z49909-6|CAA90109.1|  214|Caenorhabditis elegans Hypothetical
           protein C14A4.5 protein.
          Length = 214

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +3

Query: 135 RCDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLD 278
           RC+ + +  +  D    +  G TC W+ C   GD+   + +   + LD
Sbjct: 9   RCELSFL--KNADGSACFSQGATCIWASCSGPGDVHASKASDEAMTLD 54


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 159 EKLCSHHILCDTDASNVDSTI 97
           +K   HH LCDT    +D+T+
Sbjct: 719 DKKHKHHYLCDTGVYTIDATV 739


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 159 EKLCSHHILCDTDASNVDSTI 97
           +K   HH LCDT    +D+T+
Sbjct: 733 DKKHKHHYLCDTGVYTIDATV 753


>AY303579-1|AAP57301.1|  214|Caenorhabditis elegans cell
           death-related nuclease 5 protein.
          Length = 214

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +3

Query: 135 RCDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLD 278
           RC+ + +  +  D    +  G TC W+ C   GD+   + +   + LD
Sbjct: 9   RCELSFL--KNADGSACFSQGATCIWASCSGPGDVHASKASDEAMTLD 54


>AF067942-7|AAG45571.2|  200|Caenorhabditis elegans Hypothetical
           protein ZK6.3 protein.
          Length = 200

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 129 HTRCDANTISQRTCDNPQIYEMGY-TCGWSRCDCNGDL 239
           H +  +   S + C+N Q Y+M Y  C +S  D NGD+
Sbjct: 135 HDKVTSIGCSYKNCENDQGYDMRYFICKYSPID-NGDM 171


>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
            see also lmb-protein 1 protein.
          Length = 1067

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 189  EMGYTCGWSRCDCNGDLVLDEETGLC 266
            E+G TC   RCDCNG++ +  E G C
Sbjct: 996  EVGGTC--ERCDCNGNIDMAME-GSC 1018


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,166,103
Number of Sequences: 27780
Number of extensions: 227734
Number of successful extensions: 624
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)