Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9k21
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.50
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.2
Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical pr... 29 2.0
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 29 3.5
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.50
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Frame = -3
Query: 614 IPTASCWTLDTMAAAASAVPEPSKCASAMAPDPECLTTTIIHDVASSEPIIF------TF 453
+ T T T + A+++ EPS +P +T+T+ +SS + T
Sbjct: 423 VTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTS 482
Query: 452 LSCGTTAAISLCXXXXXXXXXXXXAVSVNSCAAPSLYPGCASSKARTDVGQSSASTPFST 273
S +T S + + +S A+ S+ +S+++ T QSS +T T
Sbjct: 483 TSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSET 542
Query: 272 TT 267
TT
Sbjct: 543 TT 544
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.50
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Frame = -3
Query: 614 IPTASCWTLDTMAAAASAVPEPSKCASAMAPDPECLTTTIIHDVASSEPIIF------TF 453
+ T T T + A+++ EPS +P +T+T+ +SS + T
Sbjct: 423 VTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTS 482
Query: 452 LSCGTTAAISLCXXXXXXXXXXXXAVSVNSCAAPSLYPGCASSKARTDVGQSSASTPFST 273
S +T S + + +S A+ S+ +S+++ T QSS +T T
Sbjct: 483 TSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSET 542
Query: 272 TT 267
TT
Sbjct: 543 TT 544
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/97 (25%), Positives = 43/97 (44%)
Frame = +1
Query: 286 VLADDCPTSVRALLEAHPGYREGAAQLLTETARVVGPAGVLYVGQREMAAVVPHDKNVNI 465
VLADD P ++A+ ++G +L A P + Y +E ++P D+N I
Sbjct: 14445 VLADDAPRVLKAIKPVKIP-KKGELRLECHAAGHPAPEYIWYKDGKE---IIPTDENTEI 14500
Query: 466 IGSDDATSCIIVVVRHSGSGAIALAHLDGSGTAEAAA 576
+ ++ II + G + + GTAE+ A
Sbjct: 14501 VNEGSMSALIIHELAGEDVGLYKVLVENIHGTAESEA 14537
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/97 (25%), Positives = 43/97 (44%)
Frame = +1
Query: 286 VLADDCPTSVRALLEAHPGYREGAAQLLTETARVVGPAGVLYVGQREMAAVVPHDKNVNI 465
VLADD P ++A+ ++G +L A P + Y +E ++P D+N I
Sbjct: 14445 VLADDAPRVLKAIKPVKIP-KKGELRLECHAAGHPAPEYIWYKDGKE---IIPTDENTEI 14500
Query: 466 IGSDDATSCIIVVVRHSGSGAIALAHLDGSGTAEAAA 576
+ ++ II + G + + GTAE+ A
Sbjct: 14501 VNEGSMSALIIHELAGEDVGLYKVLVENIHGTAESEA 14537
>Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical
protein B0464.9 protein.
Length = 364
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 460 NIIGSDDATSCIIVVVRHSGSGAIALAHLDGSGTAEAAAAMV 585
NI G DD+ CI V HS GA+A+ L+ + AA++
Sbjct: 149 NIFGEDDSPVCI---VGHSMGGALAIHTLNAKMISSKVAALI 187
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 327 RGASGVQRRRRATVDRNGARCGTRGRSLRRTERNGRR 437
R S +RRR + DR+G R R RS R +RN R
Sbjct: 102 RSGSRDRRRRSRSRDRDGGRRRDRSRSRDRRDRNDDR 138
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -3
Query: 614 IPTASCWTLDTMAA---AASAVPEPSKCASAMAPDPECLTTTIIHDVASSEPIIFTFLSC 444
+P + LD ++ A+SA+P P +S+ +PD T + + +P++ F+S
Sbjct: 112 LPLVTSGDLDDLSMKILASSAIPGPPIISSSNSPD-SSTTAVTTSQITAFQPLLNNFVS- 169
Query: 443 GTTAAIS 423
TTA+ S
Sbjct: 170 STTASTS 176
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -3
Query: 614 IPTASCWTLDTMAA---AASAVPEPSKCASAMAPDPECLTTTIIHDVASSEPIIFTFLSC 444
+P + LD ++ A+SA+P P +S+ +PD T + + +P++ F+S
Sbjct: 132 LPLVTSGDLDDLSMKILASSAIPGPPIISSSNSPD-SSTTAVTTSQITAFQPLLNNFVS- 189
Query: 443 GTTAAIS 423
TTA+ S
Sbjct: 190 STTASTS 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,994,720
Number of Sequences: 27780
Number of extensions: 323416
Number of successful extensions: 983
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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