Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9k20
         (347 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49830-14|AAK31479.1|  182|Caenorhabditis elegans Hypothetical p...    30   0.52 
Z83105-1|CAB05480.1|  335|Caenorhabditis elegans Hypothetical pr...    27   2.8  
U70852-11|AAK29818.1|   99|Caenorhabditis elegans Neuropeptide-l...    26   6.4  
Z81055-11|CAB02899.2|  384|Caenorhabditis elegans Hypothetical p...    26   8.5  
Z74026-2|CAD54122.1|  588|Caenorhabditis elegans Hypothetical pr...    26   8.5  
AL132904-24|CAC35834.2|  459|Caenorhabditis elegans Hypothetical...    26   8.5  
AL022716-6|CAA18774.2|  384|Caenorhabditis elegans Hypothetical ...    26   8.5  

>U49830-14|AAK31479.1|  182|Caenorhabditis elegans Hypothetical
           protein C33F10.11 protein.
          Length = 182

 Score = 29.9 bits (64), Expect = 0.52
 Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = -1

Query: 245 FLFFLPFI--STILSIALEPRFHSSLASNPI 159
           FL F+PF+  S IL IAL   F+++LASN I
Sbjct: 9   FLVFIPFLTLSVILLIALLAVFNTTLASNSI 39


>Z83105-1|CAB05480.1|  335|Caenorhabditis elegans Hypothetical
           protein F14H3.1 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 254 LHWFLFFLPFISTILSIALEPRFHSSLASNPITVL 150
           +HW  ++LP +  +LS  L P F   + +  IT L
Sbjct: 3   IHWTHYYLPKVFGVLSFILNPFFIWLILNENITAL 37


>U70852-11|AAK29818.1|   99|Caenorhabditis elegans Neuropeptide-like
           protein protein20 protein.
          Length = 99

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 12/51 (23%), Positives = 28/51 (54%)
 Frame = +1

Query: 4   ILVLLLIISPMNSFKSPKELNREIQKLENNKYTTSDVLVGKAMDFIYSNKT 156
           +L LLL+I P  +F + +  + + + + NN+    D+ + K   F ++ ++
Sbjct: 5   LLALLLLIVPFFAFAASQYSDDDSELMSNNERFARDLELRKKFAFAFAKRS 55


>Z81055-11|CAB02899.2|  384|Caenorhabditis elegans Hypothetical
           protein C24F3.3 protein.
          Length = 384

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +1

Query: 13  LLLIISPMNSFKSPKELNREIQKLENNKYTT-SDVLVGKAMDFIYSNKTVMGLLARELWN 189
           LLL     N+ K   E+N+E+    N ++T   D+L+  A    Y N     L  R +  
Sbjct: 16  LLLFCKISNAVKQSWEINQELITEANKEHTVFGDMLLTPAQLIRYENSKDSDLSIRGVSI 75

Query: 190 LGSS 201
            GSS
Sbjct: 76  KGSS 79


>Z74026-2|CAD54122.1|  588|Caenorhabditis elegans Hypothetical
           protein B0240.4 protein.
          Length = 588

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -1

Query: 248 WFLFFLPFISTILSIALEPRFHSSLASNPITVLLE*MKSIAFP 120
           W L  +PF   +  +    +F+S ++   +  ++  MK I+FP
Sbjct: 273 WLLLNIPFHVVLFGLCFTQQFYSKISMKIVNQIV--MKPISFP 313


>AL132904-24|CAC35834.2|  459|Caenorhabditis elegans Hypothetical
           protein Y111B2A.4 protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 115 LVGKAMDFIYSNKTVMGLLARELWNLGSSAIDRIVEMK 228
           +V +  D I   KT M  L    WN  +S ID+I E+K
Sbjct: 93  MVKQRDDEIKKLKTQMEQLQESGWNESTSDIDQICELK 130


>AL022716-6|CAA18774.2|  384|Caenorhabditis elegans Hypothetical
           protein C24F3.3 protein.
          Length = 384

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +1

Query: 13  LLLIISPMNSFKSPKELNREIQKLENNKYTT-SDVLVGKAMDFIYSNKTVMGLLARELWN 189
           LLL     N+ K   E+N+E+    N ++T   D+L+  A    Y N     L  R +  
Sbjct: 16  LLLFCKISNAVKQSWEINQELITEANKEHTVFGDMLLTPAQLIRYENSKDSDLSIRGVSI 75

Query: 190 LGSS 201
            GSS
Sbjct: 76  KGSS 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,537,032
Number of Sequences: 27780
Number of extensions: 110218
Number of successful extensions: 275
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)