BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9k18
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ525179-1|ABF56619.1| 244|Homo sapiens Lcrp369 protein. 143 5e-34
BC001722-1|AAH01722.1| 244|Homo sapiens chromosome 14 open read... 143 5e-34
AF151857-1|AAD34094.1| 244|Homo sapiens CGI-99 protein protein. 143 5e-34
AF100755-1|AAD43019.1| 244|Homo sapiens homeobox prox 1 protein. 143 5e-34
AF087877-1|AAP97177.1| 244|Homo sapiens CLE7 protein. 143 5e-34
AY817175-1|AAV54070.1| 244|Homo sapiens CLE protein. 140 3e-33
>DQ525179-1|ABF56619.1| 244|Homo sapiens Lcrp369 protein.
Length = 244
Score = 143 bits (347), Expect = 5e-34
Identities = 85/226 (37%), Positives = 122/226 (53%), Gaps = 22/226 (9%)
Frame = +3
Query: 75 LFKLKLSALGHPNPEFFNCEDEKEYRSVVLWLEDQKIRHYKIEDREGLRNIDSDFWKEAY 254
+F+ KL+AL + NP FNC+DE E+R+ ++WLEDQKIRHYKIEDR LRNI S W + +
Sbjct: 1 MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFF 60
Query: 255 NTYQKDLVSPAAEGTLNEQLNWLLSYAVRLEYADNVDXXXXXXXXXXXXXXXXV-SSNPL 431
Y +D+ P E ++WLL AVRLEY DN + ++ PL
Sbjct: 61 EKYLRDVNCPFKIQDRQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNSKTADNATKNAEPL 120
Query: 432 DNLDFSSQAFKAGVNRVCTVASIGPHPDPKIRLAALA----------KVLKTSPHPEPLQ 581
NLD ++ FKAGV + + I H D + L A+ V K + E L
Sbjct: 121 INLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQTKEGLP 180
Query: 582 TEVN-----------LVNQPSDVLKLLFVQDLRNLXTKINEALVAV 686
++ ++N+ + +L+LL +++LR L TKINEA+VAV
Sbjct: 181 VALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAV 226
>BC001722-1|AAH01722.1| 244|Homo sapiens chromosome 14 open reading
frame 166 protein.
Length = 244
Score = 143 bits (347), Expect = 5e-34
Identities = 85/226 (37%), Positives = 122/226 (53%), Gaps = 22/226 (9%)
Frame = +3
Query: 75 LFKLKLSALGHPNPEFFNCEDEKEYRSVVLWLEDQKIRHYKIEDREGLRNIDSDFWKEAY 254
+F+ KL+AL + NP FNC+DE E+R+ ++WLEDQKIRHYKIEDR LRNI S W + +
Sbjct: 1 MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFF 60
Query: 255 NTYQKDLVSPAAEGTLNEQLNWLLSYAVRLEYADNVDXXXXXXXXXXXXXXXXV-SSNPL 431
Y +D+ P E ++WLL AVRLEY DN + ++ PL
Sbjct: 61 EKYLRDVNCPFKIQDRQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNSKTADNATKNAEPL 120
Query: 432 DNLDFSSQAFKAGVNRVCTVASIGPHPDPKIRLAALA----------KVLKTSPHPEPLQ 581
NLD ++ FKAGV + + I H D + L A+ V K + E L
Sbjct: 121 INLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQTKEGLP 180
Query: 582 TEVN-----------LVNQPSDVLKLLFVQDLRNLXTKINEALVAV 686
++ ++N+ + +L+LL +++LR L TKINEA+VAV
Sbjct: 181 VALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAV 226
>AF151857-1|AAD34094.1| 244|Homo sapiens CGI-99 protein protein.
Length = 244
Score = 143 bits (347), Expect = 5e-34
Identities = 85/226 (37%), Positives = 122/226 (53%), Gaps = 22/226 (9%)
Frame = +3
Query: 75 LFKLKLSALGHPNPEFFNCEDEKEYRSVVLWLEDQKIRHYKIEDREGLRNIDSDFWKEAY 254
+F+ KL+AL + NP FNC+DE E+R+ ++WLEDQKIRHYKIEDR LRNI S W + +
Sbjct: 1 MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFF 60
Query: 255 NTYQKDLVSPAAEGTLNEQLNWLLSYAVRLEYADNVDXXXXXXXXXXXXXXXXV-SSNPL 431
Y +D+ P E ++WLL AVRLEY DN + ++ PL
Sbjct: 61 EKYLRDVNCPFKIQDRQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNSKTADNATKNAEPL 120
Query: 432 DNLDFSSQAFKAGVNRVCTVASIGPHPDPKIRLAALA----------KVLKTSPHPEPLQ 581
NLD ++ FKAGV + + I H D + L A+ V K + E L
Sbjct: 121 INLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQTKEGLP 180
Query: 582 TEVN-----------LVNQPSDVLKLLFVQDLRNLXTKINEALVAV 686
++ ++N+ + +L+LL +++LR L TKINEA+VAV
Sbjct: 181 VALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAV 226
>AF100755-1|AAD43019.1| 244|Homo sapiens homeobox prox 1 protein.
Length = 244
Score = 143 bits (347), Expect = 5e-34
Identities = 85/226 (37%), Positives = 122/226 (53%), Gaps = 22/226 (9%)
Frame = +3
Query: 75 LFKLKLSALGHPNPEFFNCEDEKEYRSVVLWLEDQKIRHYKIEDREGLRNIDSDFWKEAY 254
+F+ KL+AL + NP FNC+DE E+R+ ++WLEDQKIRHYKIEDR LRNI S W + +
Sbjct: 1 MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFF 60
Query: 255 NTYQKDLVSPAAEGTLNEQLNWLLSYAVRLEYADNVDXXXXXXXXXXXXXXXXV-SSNPL 431
Y +D+ P E ++WLL AVRLEY DN + ++ PL
Sbjct: 61 EKYLRDVNCPFKIQDRQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNSKTADNATKNAEPL 120
Query: 432 DNLDFSSQAFKAGVNRVCTVASIGPHPDPKIRLAALA----------KVLKTSPHPEPLQ 581
NLD ++ FKAGV + + I H D + L A+ V K + E L
Sbjct: 121 INLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQTKEGLP 180
Query: 582 TEVN-----------LVNQPSDVLKLLFVQDLRNLXTKINEALVAV 686
++ ++N+ + +L+LL +++LR L TKINEA+VAV
Sbjct: 181 VALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAV 226
>AF087877-1|AAP97177.1| 244|Homo sapiens CLE7 protein.
Length = 244
Score = 143 bits (347), Expect = 5e-34
Identities = 85/226 (37%), Positives = 122/226 (53%), Gaps = 22/226 (9%)
Frame = +3
Query: 75 LFKLKLSALGHPNPEFFNCEDEKEYRSVVLWLEDQKIRHYKIEDREGLRNIDSDFWKEAY 254
+F+ KL+AL + NP FNC+DE E+R+ ++WLEDQKIRHYKIEDR LRNI S W + +
Sbjct: 1 MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFF 60
Query: 255 NTYQKDLVSPAAEGTLNEQLNWLLSYAVRLEYADNVDXXXXXXXXXXXXXXXXV-SSNPL 431
Y +D+ P E ++WLL AVRLEY DN + ++ PL
Sbjct: 61 EKYLRDVNCPFKIQDRQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNSKTADNATKNAEPL 120
Query: 432 DNLDFSSQAFKAGVNRVCTVASIGPHPDPKIRLAALA----------KVLKTSPHPEPLQ 581
NLD ++ FKAGV + + I H D + L A+ V K + E L
Sbjct: 121 INLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQTKEGLP 180
Query: 582 TEVN-----------LVNQPSDVLKLLFVQDLRNLXTKINEALVAV 686
++ ++N+ + +L+LL +++LR L TKINEA+VAV
Sbjct: 181 VALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAV 226
>AY817175-1|AAV54070.1| 244|Homo sapiens CLE protein.
Length = 244
Score = 140 bits (340), Expect = 3e-33
Identities = 84/226 (37%), Positives = 121/226 (53%), Gaps = 22/226 (9%)
Frame = +3
Query: 75 LFKLKLSALGHPNPEFFNCEDEKEYRSVVLWLEDQKIRHYKIEDREGLRNIDSDFWKEAY 254
+F+ KL+AL + NP FNC+DE E+R+ ++WLEDQKI HYKIEDR LRNI S W + +
Sbjct: 1 MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIGHYKIEDRGNLRNIHSSDWPKFF 60
Query: 255 NTYQKDLVSPAAEGTLNEQLNWLLSYAVRLEYADNVDXXXXXXXXXXXXXXXXV-SSNPL 431
Y +D+ P E ++WLL AVRLEY DN + ++ PL
Sbjct: 61 EKYLRDVNCPFKIQDRQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNSKTADNATKNAEPL 120
Query: 432 DNLDFSSQAFKAGVNRVCTVASIGPHPDPKIRLAALA----------KVLKTSPHPEPLQ 581
NLD ++ FKAGV + + I H D + L A+ V K + E L
Sbjct: 121 INLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQTKEGLP 180
Query: 582 TEVN-----------LVNQPSDVLKLLFVQDLRNLXTKINEALVAV 686
++ ++N+ + +L+LL +++LR L TKINEA+VAV
Sbjct: 181 VALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAV 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,516,722
Number of Sequences: 237096
Number of extensions: 1601461
Number of successful extensions: 3244
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3238
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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