Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9k16
         (670 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q37959 Cluster: ORF910; n=1; Lactobacillus phage mv4|Re...    34   2.7  
UniRef50_A3Q3K7 Cluster: Putative uncharacterized protein; n=6; ...    34   3.6  
UniRef50_Q5S233 Cluster: Mitochondrial associated cysteine-rich ...    33   4.7  
UniRef50_Q5BZV4 Cluster: SJCHGC01027 protein; n=2; Schistosoma j...    33   4.7  
UniRef50_UPI0000EBDE4C Cluster: PREDICTED: similar to keratin as...    33   6.2  
UniRef50_A6QWD9 Cluster: Predicted protein; n=3; Eurotiomycetida...    33   6.2  
UniRef50_Q04924 Cluster: Glucosidase 2 subunit beta precursor; n...    33   8.2  

>UniRef50_Q37959 Cluster: ORF910; n=1; Lactobacillus phage mv4|Rep:
           ORF910 - Lactococcus delbrueckii bacteriophage mv4
          Length = 910

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -2

Query: 642 QGGTFAGSPHFDGPRAHVAFNGNVPGTTYKEISGSQQLRMLLILH 508
           Q GT     +F GP+A  A N  +P T + + S  ++ ++L+  H
Sbjct: 238 QDGTLITKSYFTGPKAGAAVNIQIPNTDFTDFSIGKEFKVLVATH 282


>UniRef50_A3Q3K7 Cluster: Putative uncharacterized protein; n=6;
           Mycobacterium|Rep: Putative uncharacterized protein -
           Mycobacterium sp. (strain JLS)
          Length = 273

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
 Frame = -2

Query: 624 GSPHFDGPRAHVAFNGNVPGTTYKEISGSQQLRMLLILHSVPLERCYWKLLHNTAVFVSI 445
           G P      A VA+ GNV   +++    S+ L+  L    +PL RC  +      VF++ 
Sbjct: 85  GEPFMARQGAMVAYQGNVD-FSFEGGGASKFLKKALTGEGLPLMRCQGR----GDVFLAE 139

Query: 444 TRYDIFCLDWLASRLTTSWT---AV*RGLVG*IRTTRGRWGVSVLARGAMISVTITAIKF 274
             YD+  L    S L+ S     A   GL   I   RG      +A G + + T+    +
Sbjct: 140 RAYDVHLLKLTNSGLSISGKNVLAFSAGLDWNIERVRG----GSIATGGLFNTTLRGSGW 195

Query: 273 LAITTT*PP 247
           +A+TT  PP
Sbjct: 196 VALTTDGPP 204


>UniRef50_Q5S233 Cluster: Mitochondrial associated cysteine-rich
           protein; n=1; Sus scrofa|Rep: Mitochondrial associated
           cysteine-rich protein - Sus scrofa (Pig)
          Length = 104

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 148 PTRCEESPTCYPCLPHCPQSMVYCCDTRPKTPLRRSSCC 264
           P  C   P C P  P C      CC  +P+   +++ CC
Sbjct: 15  PECCPPKPQCCPPKPQCCPPKPQCCPPKPQCCTQQTCCC 53


>UniRef50_Q5BZV4 Cluster: SJCHGC01027 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC01027 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 381

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 178 YPCLPHC-PQSMVYCCDTRPKTPLRRSSCCDSKE 276
           YP  P C P S  YCC   P TP+RR    D+ E
Sbjct: 5   YPIPPMCLPPSGNYCCSHTPPTPIRRPWLGDNSE 38


>UniRef50_UPI0000EBDE4C Cluster: PREDICTED: similar to keratin
           associated protein 9.2; n=1; Bos taurus|Rep: PREDICTED:
           similar to keratin associated protein 9.2 - Bos taurus
          Length = 230

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +1

Query: 103 CGPFAVAPVLVTSS-YPTRCEESPTCYPCLPHCPQSMVYCCDTRPKTPLRRSSCC 264
           C    + P+ VT+   PT CE S  C  C P CPQ+     +T    P   +SCC
Sbjct: 28  CRTTCLKPICVTTCCQPTCCESS--C--CQPSCPQTCCQITETTCCKPTCVTSCC 78


>UniRef50_A6QWD9 Cluster: Predicted protein; n=3;
           Eurotiomycetidae|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 577

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 221 QQ*TIDCGQCGKHG*HVGDSSHLVGYE 141
           +Q T DC  CG HG ++ D SH+V  E
Sbjct: 442 EQWTFDCSGCGVHGENLDDGSHIVACE 468


>UniRef50_Q04924 Cluster: Glucosidase 2 subunit beta precursor; n=2;
           Saccharomyces cerevisiae|Rep: Glucosidase 2 subunit beta
           precursor - Saccharomyces cerevisiae (Baker's yeast)
          Length = 702

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
 Frame = +3

Query: 366 QALFKLLSNLLSAYLPTSQDKICHTVL----SIRRRPYCAKVSSNS 491
           Q +FK+LS+L  AY P+  DK+ +  +     +RRR   AK++++S
Sbjct: 263 QDIFKILSDLSEAYTPSLNDKVVNDNIKKFRKVRRRAEKAKINADS 308


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,405,678
Number of Sequences: 1657284
Number of extensions: 13316320
Number of successful extensions: 37884
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37841
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)