Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9k10
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053359-1|AAH53359.1|  406|Homo sapiens LCOR protein protein.         36   0.15 
AL834245-1|CAD38921.2|  433|Homo sapiens hypothetical protein pr...    36   0.15 
AL832044-1|CAD91160.1|  200|Homo sapiens hypothetical protein pr...    36   0.15 
AL442123-1|CAH70915.1|  433|Homo sapiens novel protein (likely o...    36   0.15 
AB058698-1|BAB47424.1|  572|Homo sapiens KIAA1795 protein protein.     36   0.15 
AK055258-1|BAB70892.1|  213|Homo sapiens protein ( Homo sapiens ...    34   0.45 
AK092594-1|BAC03923.1|  266|Homo sapiens protein ( Homo sapiens ...    32   2.4  
AK222973-1|BAD96693.1|  366|Homo sapiens isocitrate dehydrogenas...    30   9.6  

>BC053359-1|AAH53359.1|  406|Homo sapiens LCOR protein protein.
          Length = 406

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +2

Query: 77  QSWNEEDMAKAVAAVVSGKMGYKLASRTYHIPRSTLQRRASKIRYQQPDEPKPLM 241
           + +N E + +A++ V+SGKM    A   Y IP STL+ +  +      + PK  M
Sbjct: 347 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKM 401


>AL834245-1|CAD38921.2|  433|Homo sapiens hypothetical protein
           protein.
          Length = 433

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +2

Query: 77  QSWNEEDMAKAVAAVVSGKMGYKLASRTYHIPRSTLQRRASKIRYQQPDEPKPLM 241
           + +N E + +A++ V+SGKM    A   Y IP STL+ +  +      + PK  M
Sbjct: 347 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKM 401


>AL832044-1|CAD91160.1|  200|Homo sapiens hypothetical protein
           protein.
          Length = 200

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +2

Query: 77  QSWNEEDMAKAVAAVVSGKMGYKLASRTYHIPRSTLQRRASKIRYQQPDEPKPLM 241
           + +N E + +A++ V+SGKM    A   Y IP STL+ +  +      + PK  M
Sbjct: 114 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKM 168


>AL442123-1|CAH70915.1|  433|Homo sapiens novel protein (likely
           ortholog of mouse transcription factor MLR2)(MLR2)
           protein.
          Length = 433

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +2

Query: 77  QSWNEEDMAKAVAAVVSGKMGYKLASRTYHIPRSTLQRRASKIRYQQPDEPKPLM 241
           + +N E + +A++ V+SGKM    A   Y IP STL+ +  +      + PK  M
Sbjct: 347 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKM 401


>AB058698-1|BAB47424.1|  572|Homo sapiens KIAA1795 protein protein.
          Length = 572

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +2

Query: 77  QSWNEEDMAKAVAAVVSGKMGYKLASRTYHIPRSTLQRRASKIRYQQPDEPKPLM 241
           + +N E + +A++ V+SGKM    A   Y IP STL+ +  +      + PK  M
Sbjct: 486 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKM 540


>AK055258-1|BAB70892.1|  213|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30696 fis, clone FCBBF2000808. ).
          Length = 213

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +2

Query: 77  QSWNEEDMAKAVAAVVSGKMGYKLASRTYHIPRSTLQRRASK 202
           + ++ E M +A+A V+SGKM    A   Y +P STL+ +  +
Sbjct: 134 RQYDHEIMEEAIAMVMSGKMSVSKAQGIYGVPHSTLEYKVKE 175


>AK092594-1|BAC03923.1|  266|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35275 fis, clone PROST2006282, weakly similar to
           TRANSLATION INITIATION FACTOR IF-2. ).
          Length = 266

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +1

Query: 337 GHQRTGISIRRRQPSKP-SLRCKQPNGRRR 423
           G  R G+S+RRR+P +P ++R  QP G RR
Sbjct: 166 GPPRPGLSVRRRRPLRPGAVRKSQPPGLRR 195


>AK222973-1|BAD96693.1|  366|Homo sapiens isocitrate dehydrogenase 3
           (NAD+) alpha precursor variant protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 290 GYIKSMEKYFMGVSRRDIRELAFQYAEDNH 379
           G ++S++    GVS+R I E AF+YA +NH
Sbjct: 163 GVVQSIKLITEGVSKR-IAEFAFEYARNNH 191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,021,193
Number of Sequences: 237096
Number of extensions: 2420097
Number of successful extensions: 5342
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5342
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)