Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9k04
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039051-7|AAB94267.2|  304|Caenorhabditis elegans Serpentine re...    33   0.21 
Z68227-14|CAJ80809.1|  448|Caenorhabditis elegans Hypothetical p...    29   4.4  
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AL034393-3|CAA22319.1|  348|Caenorhabditis elegans Hypothetical ...    28   5.8  
AL032640-4|CAA21642.1|  369|Caenorhabditis elegans Hypothetical ...    28   5.8  
AF025457-3|AAB70963.2|  248|Caenorhabditis elegans Hypothetical ...    28   5.8  
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ...    28   7.7  
AL021572-2|CAA16518.1|  415|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AF039051-7|AAB94267.2|  304|Caenorhabditis elegans Serpentine
           receptor, class x protein8 protein.
          Length = 304

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
 Frame = -2

Query: 641 FVFVLTNKLVSHDSIILFQAFYF---VFAGDIHIFDYT*VF--NNTGMQRIILNQYLLCF 477
           F+F+L   + S  +   F  + F   +F GDI I  Y  V   N     ++I+  + L F
Sbjct: 126 FIFILIIAVAS--AAATFSQYIFPCCIFVGDISIMSYMAVTIPNVYSYSKLIILSFDL-F 182

Query: 476 CVSVSDILFGQIFLTDILFGQGLGSPARNYKSTKAVHFFL 357
           C  +S + +  +F+T     +G+   A + K  +   + L
Sbjct: 183 CTGISTVCYASVFITIRNASKGIEDAANSKKRKQDTRYLL 222


>Z68227-14|CAJ80809.1|  448|Caenorhabditis elegans Hypothetical
           protein F49C12.7b protein.
          Length = 448

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 251 LSTQWLCSYPDVVC*LLPAILSVVFVFHLKPY--SNWNLGHLMFSSLPFRRIFA 96
           L+T +  +YP V   LLPA+ +V+ +   + +  + W L HL   S  F RI +
Sbjct: 381 LTTTYNLAYPRVSAYLLPALTAVLELSQCQTFLQNQWLLVHLFRRSKEFIRILS 434


>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical
           protein ZK430.5 protein.
          Length = 1276

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 126 FFATVPTNFCFFILFM*TTCKFL*NAKLCLISFNNL 19
           FFA +P   CFF  +    C     A  CLI F +L
Sbjct: 144 FFAAIPAKLCFFYFYTGELC----TAVACLIDFVDL 175


>AL034393-3|CAA22319.1|  348|Caenorhabditis elegans Hypothetical
           protein Y18D10A.3 protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 65  LQVVYIKRMKKQKFVGTVAKKTSSVLNSNLNKALDER 175
           +Q  Y+K  KK   V  ++KKT S +   L   +DE+
Sbjct: 101 IQQFYMKNGKKSTMVHIISKKTVSFIGQKLAAQIDEQ 137


>AL032640-4|CAA21642.1|  369|Caenorhabditis elegans Hypothetical
           protein Y43F8A.4 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = -2

Query: 653 FLRRFVFVLTNKLVSHDSIILFQAFYFVFAGDIHIFDYT*VFNNTGMQRIILNQYLLCFC 474
           FLR  +    N  V   ++ +F +F+ VF   +HIF    +  N  M+R   N  +L   
Sbjct: 18  FLRNLLQNSQNWAVFCSNLQIFMSFFGVFFNILHIF----ILLNKSMRRQATN--VLIIG 71

Query: 473 VSVSDILF 450
           +++SDI +
Sbjct: 72  IAISDIFY 79


>AF025457-3|AAB70963.2|  248|Caenorhabditis elegans Hypothetical
           protein C08E3.5 protein.
          Length = 248

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/63 (22%), Positives = 31/63 (49%)
 Frame = +2

Query: 365 SVLLLWIYNYGPGNQALVQIKYLLKISVQIKCLIQKHKSIANIDLK*YAAYPYC*KLTYN 544
           SV+ L + N    +  ++ +  L+K+S   + +++  K + N     Y+   +C  + YN
Sbjct: 13  SVMPLHVINEILDHMEIIDLMVLMKVSRNFRSVVRNMKVLINWLTLNYSEKLHCVSIVYN 72

Query: 545 QKY 553
            +Y
Sbjct: 73  MRY 75


>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
           protein Y73F8A.5 protein.
          Length = 1019

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +3

Query: 519 RIVKNLRIIKNMYVPCENKIKSLEKYNRIMRN*FICQYKNETTQESKR*DWLKKII 686
           R+ +N R + +M V   N+    + YN + ++ F+   K E  +E K  DW K+ I
Sbjct: 174 RMPRNNRAL-SMQVDIRNE--QCQSYNDVAKSMFLKYTKKEKDEEEKNGDWRKRRI 226


>AL021572-2|CAA16518.1|  415|Caenorhabditis elegans Hypothetical
           protein W06H3.2 protein.
          Length = 415

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 27/97 (27%), Positives = 38/97 (39%)
 Frame = -1

Query: 375 SSTLFSFWYLKIKQLYC*NQFFNWQA*SLASCNCFLRIMFFSFNSMALLIS*CCLLVASR 196
           S T  SF + K  +L   N  F     +LA  N  L I   + N            ++S 
Sbjct: 153 SYTCPSFVFAKPTELT--NSSFRLSPETLAEVNSILSIYLGTHNFFNYTAKRAYDDMSSN 210

Query: 195 NFICSFRLSSKALFKLEFRTLDVFFATVPTNFCFFIL 85
            +I SF      LF+ +FR  DV F  +      F+L
Sbjct: 211 RYIISFECKEPFLFRDDFRKEDVEFVQIVIKGQSFVL 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,277,974
Number of Sequences: 27780
Number of extensions: 354127
Number of successful extensions: 875
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)