Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9k04
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          30   0.025
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      30   0.025
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        25   0.72 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   2.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.8  
M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee homeobox-...    22   5.1  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    22   5.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   5.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.1  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 29.9 bits (64), Expect = 0.025
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = -2

Query: 686 NNFLQPISTLGFLRRFVFVLTNKLVSHDSIILFQAFYFVFAGDIHIFDYT*VFNNTGM-Q 510
           N F+Q +      R  VF + NK + H +++LF+  Y         FD   VF NT +  
Sbjct: 78  NEFMQLLKHGMLPRGQVFTMMNKEMRHQAVVLFRLLY-----SAKTFD---VFYNTAVWA 129

Query: 509 RIILNQYLLCFCVSVSDI 456
           R  +N+ +  + +SV+ I
Sbjct: 130 RFNVNEQMYLYALSVAVI 147


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 29.9 bits (64), Expect = 0.025
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = -2

Query: 686 NNFLQPISTLGFLRRFVFVLTNKLVSHDSIILFQAFYFVFAGDIHIFDYT*VFNNTGM-Q 510
           N F+Q +      R  VF + NK + H +++LF+  Y         FD   VF NT +  
Sbjct: 78  NEFMQLLKHGMLPRGQVFTMMNKEMRHQAVVLFRLLY-----SAKTFD---VFYNTAVWA 129

Query: 509 RIILNQYLLCFCVSVSDI 456
           R  +N+ +  + +SV+ I
Sbjct: 130 RFNVNEQMYLYALSVAVI 147


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 506 YAAYPYC*KLTYNQ 547
           Y AYPYC  LT NQ
Sbjct: 215 YYAYPYCYNLTPNQ 228


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 543 IKNMYVPCENKIKSLEKYNRIMR 611
           +K M++P  NK+  + + NR+ R
Sbjct: 358 MKMMHLPQSNKMNRMHRMNRVNR 380


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 167 LKPYSNWNLGHLMFSSLPFRRIFAFSFFLCKQLVNFYETP 48
           L+P S W +G + FS+         + F+C   +   +TP
Sbjct: 650 LRPESGWAIGAMSFSATG----ILITLFVCGVFLKHNDTP 685


>M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E30. ).
          Length = 109

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = +2

Query: 284 DARLQACQLKNWF*QYNCFIFKYQKEKSVLLLWIYNYGPGNQALVQI 424
           D  L   Q+K WF      I K   +K+ L L +   G  N + V +
Sbjct: 56  DLGLTEAQIKIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHSTVPV 102


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = +2

Query: 284 DARLQACQLKNWF*QYNCFIFKYQKEKSVLLLWIYNYGPGNQALVQI 424
           D  L   Q+K WF      I K   +K+ L L +   G  N + V +
Sbjct: 56  DLGLNEAQIKIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHSTVPL 102


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -2

Query: 689 NNNFLQP--ISTLGFLRRFVFVLTNKLVSHDSIILFQAFYFVFAG 561
           +NN ++P  I+ L  L++    L N  ++ DS+I  QAF F  AG
Sbjct: 262 DNNIVRPDFINMLMELQKNPQKLENIKLT-DSLIAAQAFVFFLAG 305


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 540 IIKNMYVPCENKIKSLEKYNRI 605
           II+N+Y+P    I+++ KY  +
Sbjct: 646 IIQNIYIPEPQDIENIFKYGYV 667


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,792
Number of Sequences: 438
Number of extensions: 4638
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)