Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9k03
         (732 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    24   1.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    24   1.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    24   1.3  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   3.9  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 360 WYNRVDARSDHELYVPVRGRPHRRDTLRKHYLEDRSEP 473
           ++N +D +  ++L  PV G   R +    HY  D+S+P
Sbjct: 115 YFNLIDTKC-YKLEHPVTGCGERTEGRCLHYTVDKSKP 151


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 360 WYNRVDARSDHELYVPVRGRPHRRDTLRKHYLEDRSEP 473
           ++N +D +  ++L  PV G   R +    HY  D+S+P
Sbjct: 120 YFNLIDTKC-YKLEHPVTGCGERTEGRCLHYTVDKSKP 156


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 360 WYNRVDARSDHELYVPVRGRPHRRDTLRKHYLEDRSEP 473
           ++N +D +  ++L  PV G   R +    HY  D+S+P
Sbjct: 120 YFNLIDTKC-YKLEHPVTGCGERTEGRCLHYTVDKSKP 156


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 388 TMNFTYRFADDPIGETLFGN 447
           T+NFTY  A  P G+  FGN
Sbjct: 473 TINFTYSLALSPDGQ--FGN 490


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,298
Number of Sequences: 438
Number of extensions: 4935
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)