Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9j20
(651 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X92840-1|CAA63426.1| 479|Drosophila melanogaster ORD protein pr... 31 1.4
AE013599-3564|AAF46975.1| 479|Drosophila melanogaster CG3134-PA... 31 1.4
X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein. 29 7.2
L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protei... 29 7.2
BT021317-1|AAX33465.1| 1298|Drosophila melanogaster RE10602p pro... 29 7.2
BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p pro... 29 7.2
BT001872-1|AAN71644.1| 935|Drosophila melanogaster SD07661p pro... 29 7.2
AE014297-881|AAO41523.1| 935|Drosophila melanogaster CG9755-PE,... 29 7.2
AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,... 29 7.2
AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,... 29 7.2
AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,... 29 7.2
AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,... 29 7.2
>X92840-1|CAA63426.1| 479|Drosophila melanogaster ORD protein
protein.
Length = 479
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -2
Query: 626 FYENNDTNRFFLEHRCLVRIVSDVWRLG----IDAPSRFTTGADGRRLVELF 483
FY +T ++ HR L RI+ LG I+ PS FT +GR L++ F
Sbjct: 387 FYAKKNTEPKWICHRYLERIIDVALFLGVIVIIEYPSAFTLLQEGRHLIKCF 438
>AE013599-3564|AAF46975.1| 479|Drosophila melanogaster CG3134-PA
protein.
Length = 479
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -2
Query: 626 FYENNDTNRFFLEHRCLVRIVSDVWRLG----IDAPSRFTTGADGRRLVELF 483
FY +T ++ HR L RI+ LG I+ PS FT +GR L++ F
Sbjct: 387 FYAKKNTEPKWICHRYLERIIDVALFLGVIVIIEYPSAFTLLQEGRHLIKCF 438
>X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein.
Length = 1533
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 91 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 270
+Q+H AA A N +Y + ++ N ++ P Y ++ + Y V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780
Query: 271 TSWGLYPGTLL 303
WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791
>L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protein
protein.
Length = 1533
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 91 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 270
+Q+H AA A N +Y + ++ N ++ P Y ++ + Y V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780
Query: 271 TSWGLYPGTLL 303
WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791
>BT021317-1|AAX33465.1| 1298|Drosophila melanogaster RE10602p
protein.
Length = 1298
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 91 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 270
+Q+H AA A N +Y + ++ N ++ P Y ++ + Y V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780
Query: 271 TSWGLYPGTLL 303
WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791
>BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p
protein.
Length = 1533
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 91 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 270
+Q+H AA A N +Y + ++ N ++ P Y ++ + Y V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780
Query: 271 TSWGLYPGTLL 303
WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791
>BT001872-1|AAN71644.1| 935|Drosophila melanogaster SD07661p
protein.
Length = 935
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 91 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 270
+Q+H AA A N +Y + ++ N ++ P Y ++ + Y V
Sbjct: 126 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 182
Query: 271 TSWGLYPGTLL 303
WG+YPG L+
Sbjct: 183 APWGMYPGNLI 193
>AE014297-881|AAO41523.1| 935|Drosophila melanogaster CG9755-PE,
isoform E protein.
Length = 935
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 91 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 270
+Q+H AA A N +Y + ++ N ++ P Y ++ + Y V
Sbjct: 126 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 182
Query: 271 TSWGLYPGTLL 303
WG+YPG L+
Sbjct: 183 APWGMYPGNLI 193
>AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,
isoform B protein.
Length = 1185
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 91 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 270
+Q+H AA A N +Y + ++ N ++ P Y ++ + Y V
Sbjct: 376 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 432
Query: 271 TSWGLYPGTLL 303
WG+YPG L+
Sbjct: 433 APWGMYPGNLI 443
>AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,
isoform D protein.
Length = 1533
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 91 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 270
+Q+H AA A N +Y + ++ N ++ P Y ++ + Y V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780
Query: 271 TSWGLYPGTLL 303
WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791
>AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,
isoform C protein.
Length = 1533
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 91 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 270
+Q+H AA A N +Y + ++ N ++ P Y ++ + Y V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780
Query: 271 TSWGLYPGTLL 303
WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791
>AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,
isoform A protein.
Length = 1533
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 91 RQIHDAALRTGPRKISSNAHNQSYKTRS*VVIFIFNRDIDSIP*KYPDIVL*QFIYYNKV 270
+Q+H AA A N +Y + ++ N ++ P Y ++ + Y V
Sbjct: 724 QQMHMAAASQQFLAAQQQAQNAAYAAQQ-ATSYVINPGQEAAP--YMGMIAAAQMPYYGV 780
Query: 271 TSWGLYPGTLL 303
WG+YPG L+
Sbjct: 781 APWGMYPGNLI 791
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,931,700
Number of Sequences: 53049
Number of extensions: 535898
Number of successful extensions: 1614
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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