Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9j20
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81080-3|CAD30439.1|  608|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z54327-5|CAD57689.1|  238|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z54327-3|CAD36481.1|  596|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z54327-2|CAA91123.1|  658|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF480493-1|AAL84283.1|  596|Caenorhabditis elegans EFF-1B precur...    28   5.0  
AF480492-1|AAL84282.1|  658|Caenorhabditis elegans EFF-1A precur...    28   5.0  
Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.      27   8.7  
AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP ...    27   8.7  

>Z81080-3|CAD30439.1|  608|Caenorhabditis elegans Hypothetical
           protein F39H2.5 protein.
          Length = 608

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -3

Query: 610 ILIDFFLNIAVSFVLYLTSGVSESTRLQGSRLVRTVVDSSNSLRLVPHIIMY 455
           I +D+FL  + S   +LT   S+  R    +  R+V  S  + +L+PHI+ Y
Sbjct: 223 ISVDYFLKKSGSRYNFLTHAHSDHYRGLDKKWTRSVYCSPETAKLLPHIMGY 274


>Z54327-5|CAD57689.1|  238|Caenorhabditis elegans Hypothetical
           protein C26D10.5d protein.
          Length = 238

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 36  IKQQYYFTDHFNSYSCVCASNT*CCTPNRPSKDFL*CP*SVIQDKILSCY 185
           I Q+Y F       SC+C  +    T    S  F  CP S   D+  SCY
Sbjct: 116 ITQRYTFGIPEVHASCICECDATSSTCTAESHQFTACPESDKSDETSSCY 165


>Z54327-3|CAD36481.1|  596|Caenorhabditis elegans Hypothetical
           protein C26D10.5b protein.
          Length = 596

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 36  IKQQYYFTDHFNSYSCVCASNT*CCTPNRPSKDFL*CP*SVIQDKILSCY 185
           I Q+Y F       SC+C  +    T    S  F  CP S   D+  SCY
Sbjct: 116 ITQRYTFGIPEVHASCICECDATSSTCTAESHQFTACPESDKSDETSSCY 165


>Z54327-2|CAA91123.1|  658|Caenorhabditis elegans Hypothetical
           protein C26D10.5a protein.
          Length = 658

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 36  IKQQYYFTDHFNSYSCVCASNT*CCTPNRPSKDFL*CP*SVIQDKILSCY 185
           I Q+Y F       SC+C  +    T    S  F  CP S   D+  SCY
Sbjct: 116 ITQRYTFGIPEVHASCICECDATSSTCTAESHQFTACPESDKSDETSSCY 165


>AF480493-1|AAL84283.1|  596|Caenorhabditis elegans EFF-1B precursor
           protein.
          Length = 596

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 36  IKQQYYFTDHFNSYSCVCASNT*CCTPNRPSKDFL*CP*SVIQDKILSCY 185
           I Q+Y F       SC+C  +    T    S  F  CP S   D+  SCY
Sbjct: 116 ITQRYTFGIPEVHASCICECDATSSTCTAESHQFTACPESDKSDETSSCY 165


>AF480492-1|AAL84282.1|  658|Caenorhabditis elegans EFF-1A precursor
           protein.
          Length = 658

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 36  IKQQYYFTDHFNSYSCVCASNT*CCTPNRPSKDFL*CP*SVIQDKILSCY 185
           I Q+Y F       SC+C  +    T    S  F  CP S   D+  SCY
Sbjct: 116 ITQRYTFGIPEVHASCICECDATSSTCTAESHQFTACPESDKSDETSSCY 165


>Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical
           protein C05C12.3 protein.
          Length = 1694

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 614 NDTNRFFLEHRCLVRIVSDVWRLGI 540
           N+ +R FL H C   ++SD+W+ G+
Sbjct: 822 NNGHRKFLAHPCCQMLLSDLWQGGL 846


>AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.
          Length = 1694

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 614 NDTNRFFLEHRCLVRIVSDVWRLGI 540
           N+ +R FL H C   ++SD+W+ G+
Sbjct: 822 NNGHRKFLAHPCCQMLLSDLWQGGL 846


>AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP
           homologous cationchannel protein.
          Length = 1681

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 614 NDTNRFFLEHRCLVRIVSDVWRLGI 540
           N+ +R FL H C   ++SD+W+ G+
Sbjct: 809 NNGHRKFLAHPCCQMLLSDLWQGGL 833


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,992,236
Number of Sequences: 27780
Number of extensions: 279276
Number of successful extensions: 639
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)