BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9j19
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0207 + 1528951-1529499 47 1e-05
05_07_0345 - 29417029-29417769 36 0.019
07_01_0209 + 1544347-1544796 34 0.075
11_02_0117 + 8480350-8480424,8480958-8481223,8481254-8481374,848... 32 0.30
12_02_1226 - 27182423-27182768,27182855-27183765 32 0.40
07_01_0210 + 1555941-1556390 31 0.53
07_01_0211 + 1568646-1568716,1568722-1569085 31 0.70
07_01_0200 + 1433859-1434377 31 0.70
07_01_0196 + 1400708-1401226 31 0.70
07_01_0192 + 1367558-1368076 31 0.70
07_01_0188 + 1334405-1334923 31 0.70
01_04_0090 - 15940935-15941438 31 0.70
07_01_0203 + 1469575-1470045 31 0.93
07_01_0202 + 1464905-1465423 31 0.93
07_01_0199 - 1420982-1421452 31 0.93
07_01_0195 - 1387831-1388301 31 0.93
07_01_0191 - 1354678-1355148 31 0.93
07_01_0187 - 1321525-1321995 31 0.93
07_01_0208 + 1532691-1533209 30 1.6
02_05_1002 + 33426561-33427079 30 1.6
04_03_0202 + 12637271-12637499,12638217-12638821 29 2.1
07_01_0959 + 8055700-8055847,8056216-8056529,8057455-8057898 29 2.8
07_01_0958 - 8041483-8042013 29 2.8
02_03_0190 + 16188329-16188514,16188552-16188885,16190275-161907... 29 3.7
>07_01_0207 + 1528951-1529499
Length = 182
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 5/152 (3%)
Frame = +2
Query: 125 GDQCDAYDKTVLLTSAEIFQIVSRINERRNFVAMGLANFLPQAADMKEIIWSQELANFAQ 304
G C + V++T+ + S E + L N + ++E+ W +A +A+
Sbjct: 8 GAACQCF--AVVVTAIVLMAATSAAGEDTAQDFVDLHNAVRDEVGVEEVTWDDTVAAYAE 65
Query: 305 RWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTGLNVKS-----FVDMWFMPILT 469
+ QC + QP + + A G+NI ++G G + S V W
Sbjct: 66 SYAAQCQADCQP----VSTNNGTATYGENIYVVVGPAGGNDTSSSPAAAAVGAWAAEEQW 121
Query: 470 YKGNVAYYNESENHSMSYFTQLIWGESDSVGC 565
Y + + S ++TQL+W + ++GC
Sbjct: 122 YDPDTNGCSAPAGESCDHYTQLVWNATTAIGC 153
>05_07_0345 - 29417029-29417769
Length = 246
Score = 36.3 bits (80), Expect = 0.019
Identities = 25/105 (23%), Positives = 44/105 (41%)
Frame = +2
Query: 260 MKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTGLNVKSF 439
++ + WS +LA +A+RW + + + + G+N+ GT G
Sbjct: 126 LQPLKWSNKLARYARRW------SAARRFDCVMMHSPESPYGENV--FWGTGWGWRATDA 177
Query: 440 VDMWFMPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGRA 574
V W Y N + +FTQ++W ++ VGCGR+
Sbjct: 178 VKSWAGESSVYDWRGQSCNPGQ--MCGHFTQIVWNDTKLVGCGRS 220
>07_01_0209 + 1544347-1544796
Length = 149
Score = 34.3 bits (75), Expect = 0.075
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +2
Query: 269 IIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTG-LNVKSFVD 445
+ W +A +A+ + Q + + + D K G+NI G+ G S V
Sbjct: 28 VSWDDTVAAYAESYAAQRQGDCKLEHSDS-----GGKYGENI--FWGSAGGDWTAASAVS 80
Query: 446 MWFMPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGR 571
W Y + E S ++TQ++W +S ++GC R
Sbjct: 81 AWVSEKQWYDHGSNSCSAPEGSSCGHYTQVVWRDSTAIGCAR 122
>11_02_0117 +
8480350-8480424,8480958-8481223,8481254-8481374,
8481463-8481726,8482210-8482581
Length = 365
Score = 32.3 bits (70), Expect = 0.30
Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = +2
Query: 203 ERRNFVAMGLANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKV 382
E+ + + + P ++K+++W L + + + + D N D E I
Sbjct: 246 EKEKLDSFNIPIYCPSVDELKQLVWQNNLLDISDIQLLEMDGNPMDDLEPIEGTAATQAT 305
Query: 383 GQNI-ATILGTTTGLNVKSFVDMWFMPILT-YKGNVAYYNESE 505
GQ++ AT+ L F D + T + N Y ESE
Sbjct: 306 GQSMSATLRAAIESLIASHFGDSILDELFTVFARNFTSYIESE 348
>12_02_1226 - 27182423-27182768,27182855-27183765
Length = 418
Score = 31.9 bits (69), Expect = 0.40
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +2
Query: 269 IIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTGLNVKSFVDM 448
I+W+ LA +AQ + D + Q + + G+N+ + GT K VD
Sbjct: 303 IVWNATLAKYAQEYADLRRGDCQLEHS-------HGPYGENM--MFGTGKQWTWKKTVDE 353
Query: 449 WFMPILTYKGNVAYYNESENHSM-SYFTQLIWGESDSVGCGR 571
W +Y N + +M +++T ++W + +VGCGR
Sbjct: 354 WSDEKKSYDYKS---NSCKAGAMCTHYTAIVWKNTTAVGCGR 392
>07_01_0210 + 1555941-1556390
Length = 149
Score = 31.5 bits (68), Expect = 0.53
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +2
Query: 269 IIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTG-LNVKSFVD 445
+ W +A +A+ + Q + + D K G+NI G+ G S V
Sbjct: 28 VSWDDTVAAYAESYAAQRQGDCALEHSDS-----GGKYGENI--FWGSAGGDWTAASAVS 80
Query: 446 MWFMPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGR 571
W Y + + S ++TQ++W S ++GC R
Sbjct: 81 SWVAEKQWYDHDSNSCSAPAGSSCGHYTQVVWSNSTAIGCAR 122
>07_01_0211 + 1568646-1568716,1568722-1569085
Length = 144
Score = 31.1 bits (67), Expect = 0.70
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Frame = +2
Query: 275 WSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTG-LNVKSFVDMW 451
W +A +A+ + Q + + D K G+NI G+ G S V W
Sbjct: 25 WDDTVAAYAESYAAQRQGDCALEHSDS-----GGKYGENI--FWGSAGGDWTAASAVSSW 77
Query: 452 FMPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGR 571
Y + + S ++TQ++W S ++GC R
Sbjct: 78 VAEKQWYDHDSNSCSAPAGSSCGHYTQVVWSNSTAIGCAR 117
>07_01_0200 + 1433859-1434377
Length = 172
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/109 (19%), Positives = 42/109 (38%)
Frame = +2
Query: 248 QAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTGLN 427
+ + +++W+ L FA+ +V D + V G+N+ + G +
Sbjct: 43 EGVGLPDVVWNTTLQAFAESYVAVLAATCSLDHSNS----VQLGYGENLY-MGGAGSAST 97
Query: 428 VKSFVDMWFMPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGRA 574
V +W Y + ++TQ++W + S+GC RA
Sbjct: 98 AADAVGLWMEEKADYVYSSNTCTRGALLDCGHYTQVVWRSTTSIGCARA 146
>07_01_0196 + 1400708-1401226
Length = 172
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/109 (19%), Positives = 42/109 (38%)
Frame = +2
Query: 248 QAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTGLN 427
+ + +++W+ L FA+ +V D + V G+N+ + G +
Sbjct: 43 EGVGLPDVVWNTTLQAFAESYVAVLAATCSLDHSNS----VQLGYGENLY-MGGAGSAST 97
Query: 428 VKSFVDMWFMPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGRA 574
V +W Y + ++TQ++W + S+GC RA
Sbjct: 98 AADAVGLWMEEKADYVYSSNTCTRGALLDCGHYTQVVWRSTTSIGCARA 146
>07_01_0192 + 1367558-1368076
Length = 172
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/109 (19%), Positives = 42/109 (38%)
Frame = +2
Query: 248 QAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTGLN 427
+ + +++W+ L FA+ +V D + V G+N+ + G +
Sbjct: 43 EGVGLPDVVWNTTLQAFAESYVAVLAATCSLDHSNS----VQLGYGENLY-MGGAGSAST 97
Query: 428 VKSFVDMWFMPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGRA 574
V +W Y + ++TQ++W + S+GC RA
Sbjct: 98 AADAVGLWMEEKADYVYSSNTCTRGALLDCGHYTQVVWRSTTSIGCARA 146
>07_01_0188 + 1334405-1334923
Length = 172
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/109 (19%), Positives = 42/109 (38%)
Frame = +2
Query: 248 QAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTGLN 427
+ + +++W+ L FA+ +V D + V G+N+ + G +
Sbjct: 43 EGVGLPDVVWNTTLQAFAESYVAVLAATCSLDHSNS----VQLGYGENLY-MGGAGSAST 97
Query: 428 VKSFVDMWFMPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGRA 574
V +W Y + ++TQ++W + S+GC RA
Sbjct: 98 AADAVGLWMEEKADYVYSSNTCTRGALLDCGHYTQVVWRSTTSIGCARA 146
>01_04_0090 - 15940935-15941438
Length = 167
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +2
Query: 488 YYNESENHSMS-----YFTQLIWGESDSVGCGRAR 577
YYN + N + ++TQ++W +S +VGC R R
Sbjct: 108 YYNYASNSCAAGKVCGHYTQVVWRDSTNVGCARVR 142
>07_01_0203 + 1469575-1470045
Length = 156
Score = 30.7 bits (66), Expect = 0.93
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 MGLANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATI 403
+ + N A + + W LA +AQ + +Q + D R+ N + G+N++
Sbjct: 21 VNIHNAARSAVGVPALSWDDNLAAYAQGYANQRAGDCALRHSD--RN--NYQYGENLSWN 76
Query: 404 LGTTTGLNVKSFVDMWFMPILTYKGNVAYYNES--ENHSMSYFTQLIWGESDSVGC 565
+ S VD W + KG+ Y + S ++TQ++W ++ +VGC
Sbjct: 77 -PSVQAWTAASSVDQW----VAEKGSYDYASNSCVGGAMCGHYTQVVWRDTTAVGC 127
>07_01_0202 + 1464905-1465423
Length = 172
Score = 30.7 bits (66), Expect = 0.93
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 521 YFTQLIWGESDSVGCGRA 574
++TQ++W + S+GCGRA
Sbjct: 130 HYTQIVWRSTTSIGCGRA 147
>07_01_0199 - 1420982-1421452
Length = 156
Score = 30.7 bits (66), Expect = 0.93
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 MGLANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATI 403
+ + N A + + W LA +AQ + +Q + D R+ N + G+N++
Sbjct: 21 VNIHNAARSAVGVPALSWDDNLAAYAQGYANQRAGDCALRHSD--RN--NYQYGENLSWN 76
Query: 404 LGTTTGLNVKSFVDMWFMPILTYKGNVAYYNES--ENHSMSYFTQLIWGESDSVGC 565
+ S VD W + KG+ Y + S ++TQ++W ++ +VGC
Sbjct: 77 -PSVQAWTAASSVDQW----VAEKGSYDYASNSCVGGAMCGHYTQVVWRDTTAVGC 127
>07_01_0195 - 1387831-1388301
Length = 156
Score = 30.7 bits (66), Expect = 0.93
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 MGLANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATI 403
+ + N A + + W LA +AQ + +Q + D R+ N + G+N++
Sbjct: 21 VNIHNAARSAVGVPALSWDDNLAAYAQGYANQRAGDCALRHSD--RN--NYQYGENLSWN 76
Query: 404 LGTTTGLNVKSFVDMWFMPILTYKGNVAYYNES--ENHSMSYFTQLIWGESDSVGC 565
+ S VD W + KG+ Y + S ++TQ++W ++ +VGC
Sbjct: 77 -PSVQAWTAASSVDQW----VAEKGSYDYASNSCVGGAMCGHYTQVVWRDTTAVGC 127
>07_01_0191 - 1354678-1355148
Length = 156
Score = 30.7 bits (66), Expect = 0.93
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 MGLANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATI 403
+ + N A + + W LA +AQ + +Q + D R+ N + G+N++
Sbjct: 21 VNIHNAARSAVGVPALSWDDNLAAYAQGYANQRAGDCALRHSD--RN--NYQYGENLSWN 76
Query: 404 LGTTTGLNVKSFVDMWFMPILTYKGNVAYYNES--ENHSMSYFTQLIWGESDSVGC 565
+ S VD W + KG+ Y + S ++TQ++W ++ +VGC
Sbjct: 77 -PSVQAWTAASSVDQW----VAEKGSYDYASNSCVGGAMCGHYTQVVWRDTTAVGC 127
>07_01_0187 - 1321525-1321995
Length = 156
Score = 30.7 bits (66), Expect = 0.93
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 MGLANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATI 403
+ + N A + + W LA +AQ + +Q + D R+ N + G+N++
Sbjct: 21 VNIHNAARSAVGVPALSWDDNLAAYAQGYANQRAGDCALRHSD--RN--NYQYGENLSWN 76
Query: 404 LGTTTGLNVKSFVDMWFMPILTYKGNVAYYNES--ENHSMSYFTQLIWGESDSVGC 565
+ S VD W + KG+ Y + S ++TQ++W ++ +VGC
Sbjct: 77 -PSVQAWTAASSVDQW----VAEKGSYDYASNSCVGGAMCGHYTQVVWRDTTAVGC 127
>07_01_0208 + 1532691-1533209
Length = 172
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +2
Query: 275 WSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATILGTTTG-LNVKSFVDMW 451
W+ +A +AQ + Q Q D + + D + G+N+ G+ G S V W
Sbjct: 53 WNDTVAAYAQSYAAQR----QGDCKLVHSDS-GGRYGENL--FWGSAGGNWTAASAVSAW 105
Query: 452 FMPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGR 571
Y + S ++TQ++W S ++GC R
Sbjct: 106 VSEKQWYNHTSNSCSAPSGQSCGHYTQVVWRSSTAIGCAR 145
>02_05_1002 + 33426561-33427079
Length = 172
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Frame = +2
Query: 224 MGLANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATI 403
+G N A + ++W + +A +A RW + + D + G+N+
Sbjct: 42 LGQQNAARAAMGLPALVWDERVAGYA-RWYAESRRG------DCALVHSSGPYGENL--F 92
Query: 404 LGTTTGLNVKSFVDMWF--MPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGRAR 577
G+ TG + V W P Y N Y ++TQ++W + VGC
Sbjct: 93 WGSGTGWSPAQAVGAWLAEQPRYNYWSNSCY-----GGMCGHYTQIMWRATRRVGCAMVA 147
Query: 578 FY 583
Y
Sbjct: 148 CY 149
>04_03_0202 + 12637271-12637499,12638217-12638821
Length = 277
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/116 (19%), Positives = 44/116 (37%)
Frame = +2
Query: 224 MGLANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQPDKEDICRDLVNAKVGQNIATI 403
+ + N +A + + WS +A +A+ + + P + + NA VG+
Sbjct: 136 LAVHNEARRAVGVAPLAWSAGIARYAKGYAASRRGDCAPRRSPLFNFGENAFVGKGRRWN 195
Query: 404 LGTTTGLNVKSFVDMWFMPILTYKGNVAYYNESENHSMSYFTQLIWGESDSVGCGR 571
V + T G A + + + +TQ++W + VGCGR
Sbjct: 196 APALAAAWVDEGRRRYDYGSNTCAGAAAAASSGSSSPCTRYTQVVWRNTTQVGCGR 251
>07_01_0959 + 8055700-8055847,8056216-8056529,8057455-8057898
Length = 301
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +2
Query: 467 TYKGNVAYYNESENHSMS-----YFTQLIWGESDSVGCGR 571
++ G YY+ S N + ++TQ++W + +GC R
Sbjct: 232 SWVGEKPYYDRSSNSCVGGKVCGHYTQVVWSRTTQIGCAR 271
>07_01_0958 - 8041483-8042013
Length = 176
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +2
Query: 467 TYKGNVAYYNESENHSMS-----YFTQLIWGESDSVGCGR 571
++ G YY+ S N + ++TQ++W + +GC R
Sbjct: 107 SWVGEKPYYDRSSNKCVGGKVCGHYTQVVWSRTTQIGCAR 146
>02_03_0190 +
16188329-16188514,16188552-16188885,16190275-16190745,
16191055-16191249,16191519-16191643,16192082-16192142,
16192774-16193023,16193129-16193279,16193594-16193902
Length = 693
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +2
Query: 476 GNVAYYNESENHSMSYFTQLIWGESDSVGC 565
G+ ++E + + ++TQ++W ++ VGC
Sbjct: 106 GDQGGHSEKQFYKCGHYTQMVWAKTTKVGC 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,197,841
Number of Sequences: 37544
Number of extensions: 290474
Number of successful extensions: 665
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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