Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9j18
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208912-1|BAD92149.1|  282|Homo sapiens guanylate binding prote...    33   1.2  
U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein.       30   8.2  
U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein.           30   8.2  
U13879-1|AAC50115.1|  681|Homo sapiens neuron-restrictive silenc...    30   8.2  
BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing transcrip...    30   8.2  
BC038985-1|AAH38985.1|  454|Homo sapiens Similar to RE1-silencin...    30   8.2  
BC017822-1|AAH17822.1|  460|Homo sapiens Unknown (protein for IM...    30   8.2  
AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing transcrip...    30   8.2  

>AB208912-1|BAD92149.1|  282|Homo sapiens guanylate binding protein
           1, interferon-inducible, 67kD variant protein.
          Length = 282

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 394 FLFLIRNIYLRVYFNKFNTFISISSKLAQYLQMRICKLNYF 272
           +L L RN Y+R ++N  N F+  S K   +   R+C   +F
Sbjct: 4   YLALYRNTYIRQFYNFLNVFLGTSQKDETFNLPRLCIRKFF 44


>U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein.
          Length = 1088

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 399 HCNFKVIENKNYHRHVS*MRIKSHKFNC 482
           HC++K  +  N+ +HV  + +   +FNC
Sbjct: 364 HCDYKTADRSNFKKHVE-LHVNPRQFNC 390


>U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein.
          Length = 1097

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 399 HCNFKVIENKNYHRHVS*MRIKSHKFNC 482
           HC++K  +  N+ +HV  + +   +FNC
Sbjct: 365 HCDYKTADRSNFKKHVE-LHVNPRQFNC 391


>U13879-1|AAC50115.1|  681|Homo sapiens neuron-restrictive silencer
           factor protein.
          Length = 681

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 399 HCNFKVIENKNYHRHVS*MRIKSHKFNC 482
           HC++K  +  N+ +HV  + +   +FNC
Sbjct: 447 HCDYKTADRSNFKKHVE-LHVNPRQFNC 473


>BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing
           transcription factor protein.
          Length = 1097

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 399 HCNFKVIENKNYHRHVS*MRIKSHKFNC 482
           HC++K  +  N+ +HV  + +   +FNC
Sbjct: 365 HCDYKTADRSNFKKHVE-LHVNPRQFNC 391


>BC038985-1|AAH38985.1|  454|Homo sapiens Similar to RE1-silencing
           transcription factor protein.
          Length = 454

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 399 HCNFKVIENKNYHRHVS*MRIKSHKFNC 482
           HC++K  +  N+ +HV  + +   +FNC
Sbjct: 365 HCDYKTADRSNFKKHVE-LHVNPRQFNC 391


>BC017822-1|AAH17822.1|  460|Homo sapiens Unknown (protein for
           IMAGE:4690075) protein.
          Length = 460

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 399 HCNFKVIENKNYHRHVS*MRIKSHKFNC 482
           HC++K  +  N+ +HV  + +   +FNC
Sbjct: 365 HCDYKTADRSNFKKHVE-LHVNPRQFNC 391


>AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing
           transcription factor variant protein.
          Length = 1126

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 399 HCNFKVIENKNYHRHVS*MRIKSHKFNC 482
           HC++K  +  N+ +HV  + +   +FNC
Sbjct: 394 HCDYKTADRSNFKKHVE-LHVNPRQFNC 420


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,823,801
Number of Sequences: 237096
Number of extensions: 1428053
Number of successful extensions: 5596
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5596
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)