Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9j15
         (629 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p pro...   134   7e-32
AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-P...   134   7e-32
AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.    28   9.1  
AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA...    28   9.1  
AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-P...    28   9.1  

>AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p
           protein.
          Length = 204

 Score =  134 bits (325), Expect = 7e-32
 Identities = 65/140 (46%), Positives = 81/140 (57%)
 Frame = +2

Query: 185 RQTPPMLKKILQYDVQITKTFVDRALKITALKSLRNHSQLLEISCHGIVWLAGWLTFIWL 364
           R + P LK +L+ DVQ++K FV     ++  KSLR HS+ LEISC GI W   W+ FIWL
Sbjct: 2   RTSSPALKYLLEKDVQVSKHFVVAVSNLSFFKSLRIHSRFLEISCDGIAWFVSWIAFIWL 61

Query: 365 FNSKDLYQLQVNMXXXXXXXXXXXXXXXXFVRRRRPVPMNKLMEVGPDKFSFPSGHASRA 544
            +SK LYQ+QVNM                 VRRRRPV    ++ +GPDKFSFPSGHASRA
Sbjct: 62  LSSKSLYQMQVNMLFGLILDVVIVAVLKALVRRRRPVASKDMLTIGPDKFSFPSGHASRA 121

Query: 545 VLISFILIYFDSVSIIFYPP 604
             +         + IIF  P
Sbjct: 122 FFVLLFFAKLYPLHIIFLMP 141


>AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-PA
           protein.
          Length = 204

 Score =  134 bits (325), Expect = 7e-32
 Identities = 65/140 (46%), Positives = 81/140 (57%)
 Frame = +2

Query: 185 RQTPPMLKKILQYDVQITKTFVDRALKITALKSLRNHSQLLEISCHGIVWLAGWLTFIWL 364
           R + P LK +L+ DVQ++K FV     ++  KSLR HS+ LEISC GI W   W+ FIWL
Sbjct: 2   RTSSPALKYLLEKDVQVSKHFVVAVSNLSFFKSLRIHSRFLEISCDGIAWFVSWIAFIWL 61

Query: 365 FNSKDLYQLQVNMXXXXXXXXXXXXXXXXFVRRRRPVPMNKLMEVGPDKFSFPSGHASRA 544
            +SK LYQ+QVNM                 VRRRRPV    ++ +GPDKFSFPSGHASRA
Sbjct: 62  LSSKSLYQMQVNMLFGLILDVVIVAVLKALVRRRRPVASKDMLTIGPDKFSFPSGHASRA 121

Query: 545 VLISFILIYFDSVSIIFYPP 604
             +         + IIF  P
Sbjct: 122 FFVLLFFAKLYPLHIIFLMP 141


>AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.
          Length = 990

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 268 NCSKVFTEPFSITRDIMSWH 327
           NCSKVF +P ++ R I ++H
Sbjct: 284 NCSKVFCDPSNLQRHIRAYH 303


>AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA
           protein.
          Length = 316

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 482 NKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPT 607
           N  +EV PD+F  P  +      I  + +Y D V ++ YP T
Sbjct: 24  NCFVEVLPDQFIIPRKYVELGESIRSLPVYQDDVWMVSYPRT 65


>AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-PA
           protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 268 NCSKVFTEPFSITRDIMSWH 327
           NCSKVF +P ++ R I ++H
Sbjct: 402 NCSKVFCDPSNLQRHIRAYH 421


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,102,789
Number of Sequences: 53049
Number of extensions: 513184
Number of successful extensions: 990
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)