Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9j07
(740 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 47 2e-06
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 46 6e-06
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 46 6e-06
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 46 6e-06
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 46 6e-06
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 46 6e-06
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 40 3e-04
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 37 0.003
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 34 0.019
SPBC800.12c |||ubiquitin family protein, unknown|Schizosaccharom... 33 0.032
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 30 0.40
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 28 1.6
SPAC23C4.09c |||DNA-binding TFAR19-related protein|Schizosacchar... 27 2.8
SPAC16A10.03c |||zinc finger protein Pep5/Vps11 |Schizosaccharom... 27 2.8
SPBC31E1.03 |hub1|ubl4|ubiquitin-like protein modifier Hub1|Schi... 27 2.8
SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone oxidase|Schizosacch... 27 3.7
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 25 8.6
SPBC1683.04 |||glycosyl hydrolase family 3|Schizosaccharomyces p... 25 8.6
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 47.2 bits (107), Expect = 2e-06
Identities = 19/56 (33%), Positives = 37/56 (66%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLV 324
V ++ ++ + LKE ++ E E+ LI+AG+++ D ++LK + I+DG ++HLV
Sbjct: 18 VTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLV 73
Score = 33.5 bits (73), Expect = 0.032
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 10/66 (15%)
Frame = +1
Query: 514 LRQVLDNPLVQ----QMMNDPENMRSLITSNPQMQDL------MSRNPEISHMLNNPELL 663
L +L NP+VQ +M ++P+ + +I S+P +++ M ++PE + +P+ +
Sbjct: 144 LANMLSNPMVQSSINEMFSNPQMLDMIINSSPHLRNAPPYVRQMMQSPEFRRAMTDPDTM 203
Query: 664 RQTMEL 681
RQ +L
Sbjct: 204 RQMAQL 209
Score = 28.7 bits (61), Expect = 0.92
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 556 NDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRS 720
N P S+ NP+ + E+++ML+NP + E+ NP ML ++ S
Sbjct: 120 NIPMPSASMFGPNPE-NPVPPSTEELANMLSNPMVQSSINEMFSNPQMLDMIINS 173
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 91 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 243 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 319 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +1
Query: 154 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVI 327
+++I+ + + R+KE + K P Q LI+AGK M D + ++++ G +HLV+
Sbjct: 14 ELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVL 71
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +1
Query: 160 EIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKD 303
++ D I LKE + ++ + E E+ LI++G+I+ D T+ ++NIK+
Sbjct: 17 DVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKE 64
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 34.3 bits (75), Expect = 0.019
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 160 EIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQ--HNIKDGLTVHLVI 327
++ + LKE+++ F ++L LI AG+++ + L++ H+ D +T HLVI
Sbjct: 19 QVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILHDATDLVTFHLVI 76
>SPBC800.12c |||ubiquitin family protein,
unknown|Schizosaccharomyces pombe|chr 2|||Manual
Length = 137
Score = 33.5 bits (73), Expect = 0.032
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 160 EIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLT 312
EI + I LKEVL+S+ ST+P + L++ GK + ++ L + D ++
Sbjct: 75 EINVQSTILELKEVLASQLSTQPSSIRLMYKGKPLVNSRLLDDYVDADSVS 125
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 29.9 bits (64), Expect = 0.40
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +1
Query: 541 VQQMMNDPE---NMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTME 678
++ +++ PE N++ L+ N + + S NP++ L PE+L Q ++
Sbjct: 17 IEAILDKPEDEINLKELLEENGVLDECKSHNPKLLEYLCKPEVLSQLID 65
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +1
Query: 514 LRQVLDNPLVQQMMNDPENMRSLITSNPQMQ 606
LR ++D+P + ++N+PE +++LI P+ Q
Sbjct: 1169 LRSIVDSPRKKIIVNNPEILQALIKLTPRNQ 1199
>SPAC23C4.09c |||DNA-binding TFAR19-related
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 131
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 472 QARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNN 651
Q +Q E+ N +L Q+L++P ++ + + ++ M++ +ISH ++
Sbjct: 37 QQEVQDEMRQN--LLSQILEHPARDRLRRIALVRKDRAEAVEELLLRMAKTGQISHKISE 94
Query: 652 PELL 663
PEL+
Sbjct: 95 PELI 98
>SPAC16A10.03c |||zinc finger protein Pep5/Vps11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +1
Query: 490 ELLSNPDMLRQVLDNPLVQQMMNDPENMRSL 582
+LL + L++ D+ L+QQ+++DPE +++L
Sbjct: 654 DLLYSHLSLKEGQDDSLIQQIISDPETVKTL 684
>SPBC31E1.03 |hub1|ubl4|ubiquitin-like protein modifier
Hub1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 73
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/56 (21%), Positives = 30/56 (53%)
Frame = +1
Query: 154 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHL 321
+V+ D + K++++++ T+P ++ L + D TL + I DG+++ +
Sbjct: 15 RVKCMPDDTVGDFKKLVAAQTGTDPRRIVLKKWHSVFKDNITLADYEIHDGMSLEM 70
>SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone
oxidase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 306 PIFDVVLLQGIGIIHDFPGENKT*LFWFCTEF*RQHFF 193
P FD+V + + + D + K L W EF R H F
Sbjct: 193 PAFDLVATEDVTTVTDLFQDWKNNLIWESAEFVRVHVF 230
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/38 (21%), Positives = 22/38 (57%)
Frame = +1
Query: 589 SNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAML 702
S+P+ + ++ NPE + +L + + + ++ +NP +
Sbjct: 138 SDPKFMEKLASNPETASLLADSAFMAKLQKIQQNPGSI 175
>SPBC1683.04 |||glycosyl hydrolase family 3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 832
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -3
Query: 627 WISR-HEILHLWVGGDE 580
WIS H +LH+W G+E
Sbjct: 619 WISEAHTLLHIWYNGNE 635
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.130 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,865,146
Number of Sequences: 5004
Number of extensions: 54227
Number of successful extensions: 155
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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