Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9j07
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 150 1e-36
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 150 1e-36
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 150 1e-36
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 150 1e-36
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 150 1e-36
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 46 3e-05
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 46 3e-05
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 46 3e-05
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 46 3e-05
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 30 1.5
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 30 2.0
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 28 8.0
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 28 8.0
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 150 bits (363), Expect = 1e-36
Identities = 80/194 (41%), Positives = 112/194 (57%), Gaps = 1/194 (0%)
Frame = +1
Query: 157 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKX 333
VEI DA + LK+ VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRN 80
Query: 334 XXXXXXXXXXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDM 513
S+ P M A ++L+NPD
Sbjct: 81 QARPTPAPAAATPT--ASSAPSSNPTPSSQPNPTNNPFAAMGGMGSPA----DILNNPDA 134
Query: 514 LRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 693
+R V+DNP+ QQ++ +PE MR++I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 135 MRSVMDNPITQQLLGNPEFMRTIIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 194
Query: 694 AMLQELMRSHDRAL 735
M QE+MR+HD+A+
Sbjct: 195 NMFQEMMRNHDQAI 208
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 150 bits (363), Expect = 1e-36
Identities = 80/194 (41%), Positives = 112/194 (57%), Gaps = 1/194 (0%)
Frame = +1
Query: 157 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKX 333
VEI DA + LK+ VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRN 80
Query: 334 XXXXXXXXXXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDM 513
S+ P M A ++L+NPD
Sbjct: 81 QARPTPAPAAATPT--ASSAPSSNPTPSSQPNPTNNPFAAMGGMGSPA----DILNNPDA 134
Query: 514 LRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 693
+R V+DNP+ QQ++ +PE MR++I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 135 MRSVMDNPITQQLLGNPEFMRTIIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 194
Query: 694 AMLQELMRSHDRAL 735
M QE+MR+HD+A+
Sbjct: 195 NMFQEMMRNHDQAI 208
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Frame = +1
Query: 481 MQQELLSNPDMLRQVLD----NPLVQQMMNDPENMRSLI------TSNPQMQDLMSRN-P 627
+ ++++SNP M + N + Q M N+P + S++ NPQ+ + + R+ P
Sbjct: 304 LMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIPSARDNPQISEGIRRSFP 363
Query: 628 EISHMLNNPELLRQTMELARNP 693
++ +M+++P + ME RNP
Sbjct: 364 QMLNMMSDPSV----MEAMRNP 381
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 150 bits (363), Expect = 1e-36
Identities = 80/194 (41%), Positives = 112/194 (57%), Gaps = 1/194 (0%)
Frame = +1
Query: 157 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKX 333
VEI DA + LK+ VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRN 80
Query: 334 XXXXXXXXXXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDM 513
S+ P M A ++L+NPD
Sbjct: 81 QARPTPAPAAATPT--ASSAPSSNPTPSSQPNPTNNPFAAMGGMGSPA----DILNNPDA 134
Query: 514 LRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 693
+R V+DNP+ QQ++ +PE MR++I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 135 MRSVMDNPITQQLLGNPEFMRTIIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 194
Query: 694 AMLQELMRSHDRAL 735
M QE+MR+HD+A+
Sbjct: 195 NMFQEMMRNHDQAI 208
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Frame = +1
Query: 481 MQQELLSNPDMLRQVLD----NPLVQQMMNDPENMRSLI------TSNPQMQDLMSRN-P 627
+ ++++SNP M + N + Q M N+P + S++ NPQ+ + + R+ P
Sbjct: 304 LMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIPSARDNPQISEGIRRSFP 363
Query: 628 EISHMLNNPELLRQTMELARNP 693
++ +M+++P + ME RNP
Sbjct: 364 QMLNMMSDPSV----MEAMRNP 381
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 150 bits (363), Expect = 1e-36
Identities = 80/194 (41%), Positives = 112/194 (57%), Gaps = 1/194 (0%)
Frame = +1
Query: 157 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKX 333
VEI DA + LK+ VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRN 80
Query: 334 XXXXXXXXXXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDM 513
S+ P M A ++L+NPD
Sbjct: 81 QARPTPAPAAATPT--ASSAPSSNPTPSSQPNPTNNPFAAMGGMGSPA----DILNNPDA 134
Query: 514 LRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 693
+R V+DNP+ QQ++ +PE MR++I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 135 MRSVMDNPITQQLLGNPEFMRTIIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 194
Query: 694 AMLQELMRSHDRAL 735
M QE+MR+HD+A+
Sbjct: 195 NMFQEMMRNHDQAI 208
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Frame = +1
Query: 481 MQQELLSNPDMLRQVLD----NPLVQQMMNDPENMRSLI------TSNPQMQDLMSRN-P 627
+ ++++SNP M + N + Q M N+P + S++ NPQ+ + + R+ P
Sbjct: 304 LMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIPSARDNPQISEGIRRSFP 363
Query: 628 EISHMLNNPELLRQTMELARNP 693
++ +M+++P + ME RNP
Sbjct: 364 QMLNMMSDPSV----MEAMRNP 381
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 150 bits (363), Expect = 1e-36
Identities = 80/194 (41%), Positives = 112/194 (57%), Gaps = 1/194 (0%)
Frame = +1
Query: 157 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKX 333
VEI DA + LK+ VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRN 80
Query: 334 XXXXXXXXXXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDM 513
S+ P M A ++L+NPD
Sbjct: 81 QARPTPAPAAATPT--ASSAPSSNPTPSSQPNPTNNPFAAMGGMGSPA----DILNNPDA 134
Query: 514 LRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 693
+R V+DNP+ QQ++ +PE MR++I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 135 MRSVMDNPITQQLLGNPEFMRTIIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 194
Query: 694 AMLQELMRSHDRAL 735
M QE+MR+HD+A+
Sbjct: 195 NMFQEMMRNHDQAI 208
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Frame = +1
Query: 481 MQQELLSNPDMLRQVLD----NPLVQQMMNDPENMRSLI------TSNPQMQDLMSRN-P 627
+ ++++SNP M + N + Q M N+P + S++ NPQ+ + + R+ P
Sbjct: 304 LMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIPSARDNPQISEGIRRSFP 363
Query: 628 EISHMLNNPELLRQTMELARNP 693
++ +M+++P + ME RNP
Sbjct: 364 QMLNMMSDPSV----MEAMRNP 381
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 116 bits (278), Expect = 2e-26
Identities = 46/82 (56%), Positives = 68/82 (82%)
Frame = +1
Query: 490 ELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQ 669
++L+NPD +R V+DNP+ QQ++ +PE MR++I SNPQ Q L+ RNPE+ H+LN+P ++RQ
Sbjct: 109 DILNNPDAMRSVMDNPITQQLLGNPEFMRTIIQSNPQFQALIERNPEVGHILNDPNVMRQ 168
Query: 670 TMELARNPAMLQELMRSHDRAL 735
TME+ RNP M QE+MR+HD+A+
Sbjct: 169 TMEMIRNPNMFQEMMRNHDQAI 190
Score = 64.5 bits (150), Expect = 8e-11
Identities = 53/170 (31%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Frame = +1
Query: 157 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKX 333
VEI DA + LK+ VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRN 80
Query: 334 XXXXXXXXXXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDM 513
+ T + MD + Q+LL NP+
Sbjct: 81 QARPTPAPAAATPTASSAPT---MGGMGSPADILNNPDAMRSVMDNP--ITQQLLGNPEF 135
Query: 514 LRQVLD-----------NPLVQQMMNDPENMRSL--ITSNPQMQDLMSRN 624
+R ++ NP V ++NDP MR + NP M M RN
Sbjct: 136 MRTIIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRN 185
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Frame = +1
Query: 481 MQQELLSNPDMLRQVLD----NPLVQQMMNDPENMRSLI------TSNPQMQDLMSRN-P 627
+ ++++SNP M + N + Q M N+P + S++ NPQ+ + + R+ P
Sbjct: 286 LMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIPSARDNPQISEGIRRSFP 345
Query: 628 EISHMLNNPELLRQTMELARNP 693
++ +M+++P + ME RNP
Sbjct: 346 QMLNMMSDPSV----MEAMRNP 363
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 116 bits (278), Expect = 2e-26
Identities = 46/82 (56%), Positives = 68/82 (82%)
Frame = +1
Query: 490 ELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQ 669
++L+NPD +R V+DNP+ QQ++ +PE MR++I SNPQ Q L+ RNPE+ H+LN+P ++RQ
Sbjct: 109 DILNNPDAMRSVMDNPITQQLLGNPEFMRTIIQSNPQFQALIERNPEVGHILNDPNVMRQ 168
Query: 670 TMELARNPAMLQELMRSHDRAL 735
TME+ RNP M QE+MR+HD+A+
Sbjct: 169 TMEMIRNPNMFQEMMRNHDQAI 190
Score = 64.5 bits (150), Expect = 8e-11
Identities = 53/170 (31%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Frame = +1
Query: 157 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKX 333
VEI DA + LK+ VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRN 80
Query: 334 XXXXXXXXXXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDM 513
+ T + MD + Q+LL NP+
Sbjct: 81 QARPTPAPAAATPTASSAPT---MGGMGSPADILNNPDAMRSVMDNP--ITQQLLGNPEF 135
Query: 514 LRQVLD-----------NPLVQQMMNDPENMRSL--ITSNPQMQDLMSRN 624
+R ++ NP V ++NDP MR + NP M M RN
Sbjct: 136 MRTIIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRN 185
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Frame = +1
Query: 481 MQQELLSNPDMLRQVLD----NPLVQQMMNDPENMRSLI------TSNPQMQDLMSRN-P 627
+ ++++SNP M + N + Q M N+P + S++ NPQ+ + + R+ P
Sbjct: 286 LMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIPSARDNPQISEGIRRSFP 345
Query: 628 EISHMLNNPELLRQTMELARNP 693
++ +M+++P + ME RNP
Sbjct: 346 QMLNMMSDPSV----MEAMRNP 363
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 154 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVI 327
+++IE + ++R+KE + K P Q LIFAGK MND T + + G +HLV+
Sbjct: 14 ELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVL 71
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 91 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 91 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 471 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 547 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 623 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 699 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 775 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 91 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 471 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 547 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 623 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 699 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 775 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLR 832
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 330
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 241 LIFAGKIMNDADTLKQHNIKDGLTVHLV 324
+I G+++N T++ I DG TVHLV
Sbjct: 63 VIAGGRVLNSTQTVQAAGISDGQTVHLV 90
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 241 LIFAGKIMNDADTLKQHNIKDGLTVHLV 324
+I G+++N T++ I DG TVHLV
Sbjct: 63 VIAGGRVLNSTQTVQAAGISDGQTVHLV 90
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 157 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLV 324
+ I+ ++ LK + +K P+Q LIF + + L +NI+D +HLV
Sbjct: 175 ISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +1
Query: 505 PDMLRQVLDNPLVQQMMNDPENMRSL----ITSNPQMQDLMSRNPEISH-MLNNPELLRQ 669
P M++QV PL+ Q + P N+ + N Q LM+R P ML N L
Sbjct: 223 PLMMQQVRPTPLMSQPTSLPSNLNQAPQMRLQINGQQVPLMNRAPVPQQTMLGNGPLGGM 282
Query: 670 TMELARNPAML 702
++ + P M+
Sbjct: 283 NQQIQQQPQMM 293
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +1
Query: 622 NPEISHMLNNPELLRQTMELARNPAMLQELMRS 720
+PEI+ + +PE+L M++ +NPA + + + +
Sbjct: 326 DPEIAAAIQDPEVLPALMDIMQNPANMMKYINN 358
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +1
Query: 622 NPEISHMLNNPELLRQTMELARNPAMLQELMRS 720
+PEI+ + +PE+L M++ +NPA + + + +
Sbjct: 326 DPEIAAAIQDPEVLPALMDIMQNPANMMKYINN 358
>Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical
protein F22D6.5 protein.
Length = 775
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 235 LCLIFAGKIMNDADTLKQHNIKDGLTVHLV 324
LCL+F MN + LK++ KDGL + V
Sbjct: 530 LCLVFENLSMNLRELLKKYGQKDGLHLKAV 559
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 463 MDLQARMQQELLSNPDMLRQVLDNPLVQQMMN 558
+DLQ R+ E L + + LR++L PL+ M++
Sbjct: 422 VDLQLRIISENLHSNENLRRILSRPLISLMLS 453
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 463 MDLQARMQQELLSNPDMLRQVLDNPLVQQMMN 558
+DLQ R+ E L + + LR++L PL+ M++
Sbjct: 422 VDLQLRIISENLHSNENLRRILSRPLISLMLS 453
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.130 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,062,470
Number of Sequences: 27780
Number of extensions: 317533
Number of successful extensions: 852
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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