Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9j07
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   7.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.0  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 440 WALVRVLLWISRLECNRNFCPTLICS 517
           W L+ + L  + L    +FC  L CS
Sbjct: 135 WLLLMLYLLFATLPLRLSFCVVLACS 160


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 652 PELLRQTMELARNPAMLQEL 711
           P+ +   MEL +NP  L+ +
Sbjct: 268 PDFINMLMELQKNPQKLENI 287


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 290  CCFRVSASFMIFPAKIRHNCSGSVLN 213
            C FR    F+   A I + C G  LN
Sbjct: 1615 CLFRKPEHFVASYALISNQCEGDSLN 1640


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.130    0.356 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,328
Number of Sequences: 438
Number of extensions: 3700
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)