Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9j06
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   2.8  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   2.8  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   6.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   6.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   6.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   6.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   6.4  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 318 ILVSFFGCAKSSSEHPGSDYGNV 386
           I+  + G  K + +HP  D+G+V
Sbjct: 68  IIEDYHGGFKKTDKHPPKDFGDV 90


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 318 ILVSFFGCAKSSSEHPGSDYGNV 386
           I+  + G  K + +HP  D+G+V
Sbjct: 84  IIEDYHGGFKKTDKHPPKDFGDV 106


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 215 IYKSRDGSLYLNDRFINIIHSLSG 286
           IYK+  G+ +    F NI+    G
Sbjct: 263 IYKTEGGNAFFKGAFSNILRGTGG 286


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 623 SSKSCHSGY 649
           + KSCHSGY
Sbjct: 492 NKKSCHSGY 500


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 623 SSKSCHSGY 649
           + KSCHSGY
Sbjct: 492 NKKSCHSGY 500


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 215 IYKSRDGSLYLNDRFINIIHSLSG 286
           IYK+  G+ +    F NI+    G
Sbjct: 263 IYKTEGGNAFFKGAFSNILRGTGG 286


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 623 SSKSCHSGY 649
           + KSCHSGY
Sbjct: 492 NKKSCHSGY 500


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,496
Number of Sequences: 438
Number of extensions: 3864
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)