Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9i20
         (566 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003291-1|AAO25051.1|  453|Drosophila melanogaster GM01959p pro...    28   7.7  
AE013599-551|AAG22303.1|  453|Drosophila melanogaster CG2915-PB,...    28   7.7  
AE013599-550|AAF59162.2|  453|Drosophila melanogaster CG2915-PA,...    28   7.7  

>BT003291-1|AAO25051.1|  453|Drosophila melanogaster GM01959p
           protein.
          Length = 453

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 12/62 (19%)
 Frame = -3

Query: 303 WVIFPCENSSSIKLPFK------------GFFSSIRWKVDFEGHWNTYAARPSSPVKYDD 160
           W+IFPC N    K  F+            G    +    ++  HWN+     S P +YD 
Sbjct: 243 WIIFPCVNPDGYKYTFEHDRMWRKNRQLFGTCRGVDLNRNYPDHWNS-TGSSSDPTRYDF 301

Query: 159 VG 154
            G
Sbjct: 302 AG 303


>AE013599-551|AAG22303.1|  453|Drosophila melanogaster CG2915-PB,
           isoform B protein.
          Length = 453

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 12/62 (19%)
 Frame = -3

Query: 303 WVIFPCENSSSIKLPFK------------GFFSSIRWKVDFEGHWNTYAARPSSPVKYDD 160
           W+IFPC N    K  F+            G    +    ++  HWN+     S P +YD 
Sbjct: 243 WIIFPCVNPDGYKYTFEHDRMWRKNRQLFGTCRGVDLNRNYPDHWNS-TGSSSDPTRYDF 301

Query: 159 VG 154
            G
Sbjct: 302 AG 303


>AE013599-550|AAF59162.2|  453|Drosophila melanogaster CG2915-PA,
           isoform A protein.
          Length = 453

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 12/62 (19%)
 Frame = -3

Query: 303 WVIFPCENSSSIKLPFK------------GFFSSIRWKVDFEGHWNTYAARPSSPVKYDD 160
           W+IFPC N    K  F+            G    +    ++  HWN+     S P +YD 
Sbjct: 243 WIIFPCVNPDGYKYTFEHDRMWRKNRQLFGTCRGVDLNRNYPDHWNS-TGSSSDPTRYDF 301

Query: 159 VG 154
            G
Sbjct: 302 AG 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,319,934
Number of Sequences: 53049
Number of extensions: 508624
Number of successful extensions: 1047
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)