Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9i20
         (566 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas...    34   0.062
Z78014-2|CAB01429.1|  122|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AF045643-6|AAC02593.2|  570|Caenorhabditis elegans Hypothetical ...    28   5.4  

>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
           protein 11 protein.
          Length = 1032

 Score = 34.3 bits (75), Expect = 0.062
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +2

Query: 158 TSSYFTGLEGLAA*VFQCPSKSTFHLIEEKKPLNGNFILEEFSQGNITQNTWYFLKMNSL 337
           TS+ FTGLE +   + +   K+  ++I    P++G F +   S   + +   YF+ M S 
Sbjct: 127 TSAMFTGLESVIDVILETYMKTRIYVIVLDLPVSGTFFMNAMSTMGLLETGKYFVVMMSS 186

Query: 338 IK 343
           I+
Sbjct: 187 IE 188


>Z78014-2|CAB01429.1|  122|Caenorhabditis elegans Hypothetical
           protein F42E8.2 protein.
          Length = 122

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
 Frame = -3

Query: 339 IKEFIFRKYHVFWVIFPCENSSSIKLPFKGF------FSSIRWKVDFEGHWNTYAARPSS 178
           +K FI RKY      FPCEN  + K+ FK F       + +   VD  G  +    R + 
Sbjct: 18  VKGFI-RKYEDELKGFPCENVCAEKIIFKSFNNNEYRIAPVFGFVDPSGSKDVVITRTAG 76

Query: 177 PVKYDD-VGHFPSIMDERRADICQKKCFFC 91
             K D  V HF     +     C   C+ C
Sbjct: 77  APKDDKLVIHFAPAPADATDACCSHSCWNC 106


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
            F55H12.3 protein.
          Length = 2972

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = -3

Query: 246  FSSIRWKVDFEGHWNTYAARPSSPVKYDDVGHFPSIMDERRA-DICQKKCFFCIYTFCIY 70
            +S +     ++ +W  Y     +P  Y  +      MD   A D+C  K F C++ F  Y
Sbjct: 965  YSCVETVCKYDINWAVYGLDVIAPPVYPQIYRSGDYMDYLYANDLCSSKGFPCVFQFQEY 1024


>AF045643-6|AAC02593.2|  570|Caenorhabditis elegans Hypothetical
           protein F58H7.2 protein.
          Length = 570

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 193 CVSVPVSFKIDFPPYRRKKTLK 258
           C+ +PVS +I  PPYR +  L+
Sbjct: 533 CIGLPVSVQIATPPYREEMCLR 554


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,302,511
Number of Sequences: 27780
Number of extensions: 296727
Number of successful extensions: 650
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)