Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9i19
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 41 6e-04
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 33 0.12
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 33 0.12
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.22
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 32 0.29
U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe chro... 31 0.50
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 31 0.66
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 31 0.66
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 31 0.87
AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical ... 31 0.87
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical ... 30 1.5
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 29 2.0
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 2.7
U80451-2|AAB37837.1| 223|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 2.7
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 29 3.5
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 28 4.6
AY347577-1|AAP97871.1| 322|Caenorhabditis elegans COLlagen stru... 28 4.6
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 4.6
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 28 4.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 4.6
AC006665-1|AAF39908.1| 322|Caenorhabditis elegans Dumpy : short... 28 4.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 6.1
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 6.1
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 28 6.1
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 27 8.1
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 41.1 bits (92), Expect = 6e-04
Identities = 29/83 (34%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +3
Query: 300 GPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGRAL 479
GPA V L +I PP P P FG P A I GP P G A
Sbjct: 73 GPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPPAPIIVNGPPPCFGPACPPPCFGPAC 132
Query: 480 GPAASLHGRWPPPRVEPT-PAPC 545
P+A + PPP P P PC
Sbjct: 133 APSAPIIVNGPPPCFGPACPPPC 155
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/76 (34%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Frame = +3
Query: 321 PSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGRALGPAASLH 500
P + PPP P P FG PLA I GP P G A P A +
Sbjct: 52 PIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPPAPII 111
Query: 501 GRWPPPRVEPT-PAPC 545
PPP P P PC
Sbjct: 112 VNGPPPCFGPACPPPC 127
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 33.5 bits (73), Expect = 0.12
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +3
Query: 234 VRQNPWTPTKRRGPIAAEASS--PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLA 407
VRQNP P ++ P + +A+ P PA P + PP + P PA QK P+
Sbjct: 377 VRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPA----QKAQPVT 432
Query: 408 -NIAKAGPGPASYNTEGMTAKGRALGPAASLHGRWPPPRVEPT 533
A A P S + + + + PPP+ EP+
Sbjct: 433 QQQASAPPTSPSAPVQAPNTPTQKASSQDPIVQQDPPPK-EPS 474
Score = 28.7 bits (61), Expect = 3.5
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Frame = +3
Query: 219 ETPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPP-PESRKPRAPAFTFGQKL 395
+TP V+Q P P ++ P A + P PA P + PP P ++ +AP Q
Sbjct: 302 QTPP-VQQAPPKPAVQQAPTRAAPAPPKPAPQQAPPVQQNPPKPAVQQAQAPVVQ--QAP 358
Query: 396 DPLANIAKAGPGPASYNTEGMTAKGRALGPA-ASLHGRWPPPRVEPTPAP 542
P A P P A+ A +S PP+ P AP
Sbjct: 359 APPVQQAPPKPTPQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQAP 408
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 33.5 bits (73), Expect = 0.12
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 7/133 (5%)
Frame = +3
Query: 165 KSGLTHASSLLVKQSISCETPMGVRQNPWT--PTKRRGPIAAEASSPGPAVVSLPSLIGK 338
++G +A++ VK + + TP +N PT P + P P + P K
Sbjct: 138 QTGDPYATNSTVKPATAPVTPEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTK 197
Query: 339 PPPESRKPRAPAFTFGQKLDPLANIAK----AGPGPASYNTEGMTAKGRALGPA-ASLHG 503
PP P T +++ +A + K P P E TAK P A+
Sbjct: 198 APPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTTAKVETTKPTKAAPPA 257
Query: 504 RWPPPRVEPTPAP 542
P P P+P P
Sbjct: 258 PTPVPNPVPSPPP 270
Score = 28.7 bits (61), Expect = 3.5
Identities = 25/99 (25%), Positives = 32/99 (32%), Gaps = 1/99 (1%)
Frame = +3
Query: 246 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGK-PPPESRKPRAPAFTFGQKLDPLANIAKA 422
P PT + P + P P + P K PPP + K P+ A
Sbjct: 175 PPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPN 234
Query: 423 GPGPASYNTEGMTAKGRALGPAASLHGRWPPPRVEPTPA 539
P P + + T K P A P P P PA
Sbjct: 235 PPAPENTTAKVETTKPTKAAPPAPTPVPNPVPSPPPPPA 273
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 33.5 bits (73), Expect = 0.12
Identities = 38/124 (30%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Frame = +3
Query: 255 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 434
PTK+R +A + + G A + + P PE APA L P + A A G
Sbjct: 86 PTKKRR-VARDYAEGGAAPTAPAEPVPAPAPEPEAAPAPAPVAEPALAPSPDAAPAADG- 143
Query: 435 ASYNTEGMTAKGRALGPAASLH--------GRWPPPRVEPTPAPCDYEPNKAARAVL--D 584
ASY+ G A PA G P EP P P P A A L +
Sbjct: 144 ASYSAGAAAPAGGASYPAKKRRVARDYAEGGAAPAAPAEPAPEPAP-APAPAPEAALAPE 202
Query: 585 HAPA 596
APA
Sbjct: 203 TAPA 206
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 33.1 bits (72), Expect = 0.16
Identities = 35/114 (30%), Positives = 43/114 (37%), Gaps = 1/114 (0%)
Frame = +3
Query: 258 TKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPA 437
T P A E +P PA P+ P P + + APA ++ A A+ P PA
Sbjct: 552 TPAPAPAADETPAPAPAAEETPA----PAPAAEETPAPA-PAAEETPATAPAAEETPAPA 606
Query: 438 SYNTEGMTAKGRALGPAASLHGRWPPPRVEPTPAPCD-YEPNKAARAVLDHAPA 596
E A PAA P P VE TPAP E A + PA
Sbjct: 607 PAADETP-----APAPAAE-ETPAPAPAVEETPAPAPAVEETPAPAPAAEETPA 654
Score = 32.7 bits (71), Expect = 0.22
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Frame = +3
Query: 219 ETPMGVRQNPWTPTKRRGPIAAEASS-PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKL 395
ETP TP A +A+ PA V+ P+ + PE+ ++ A ++
Sbjct: 416 ETPAPAPAAEETPAPETASAAPDAAGGAAPADVAAPADVATTAPETSSAQSAAGSYDVPS 475
Query: 396 DPLANIAKAGPGPASYNTEGMTAKGRALGPAASLHGRWPPPRVEPTPAPCDYEPNKAARA 575
+P + + A TE + +GPAAS EP PAP + A A
Sbjct: 476 EPASEVTAPIVESA---TEAPSDSAAPIGPAAS----------EPAPAPIEAPATDA--A 520
Query: 576 VLDHAPA 596
L+ APA
Sbjct: 521 TLETAPA 527
Score = 31.1 bits (67), Expect = 0.66
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Frame = +3
Query: 279 AAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTE-G 455
AAEA++ A S+P P P + + APA + P A A+ P PA E
Sbjct: 535 AAEAAAGYDAPSSVPEETPAPAPAADETPAPAPAAEETPAP-APAAEETPAPAPAAEETP 593
Query: 456 MTAKGRALGPA---ASLHGRWPPPRVEPTPAPCD-YEPNKAARAVLDHAPA 596
TA PA A+ P P E TPAP E A ++ PA
Sbjct: 594 ATAPAAEETPAPAPAADETPAPAPAAEETPAPAPAVEETPAPAPAVEETPA 644
Score = 30.3 bits (65), Expect = 1.2
Identities = 43/145 (29%), Positives = 51/145 (35%), Gaps = 15/145 (10%)
Frame = +3
Query: 219 ETPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLD 398
ETP TP P E +P PAV P+ P P + + APA +
Sbjct: 611 ETPAPAPAAEETPAP--APAVEETPAPAPAVEETPA----PAPAAEETPAPAPAAAEYAA 664
Query: 399 PLANIAKAGPGPASYNTEGMTAKGR---ALGPAA---------SLHGRWPPPRVE--PTP 536
P+A A P PA+ T A PAA + P P E P P
Sbjct: 665 PVAEETPA-PAPAAEETPAPAQAAEETPAPAPAAEETPASAPAAEETPAPAPAAEEAPAP 723
Query: 537 APCDYE-PNKAARAVLDHAPAFSIG 608
AP E P AA AP S G
Sbjct: 724 APAAPETPAPAAEGAAAPAPIVSSG 748
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.22
Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Frame = +3
Query: 246 PWTPTKRRGPIAAEASSPGPAVVSLPS--LIGKPPPESRKPRAPAFTFGQKLDPLANIAK 419
P P K P+A S P P P G PPP P G P A
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 420 AGPGPASYNTEGMTAKGRALG-PAASLHGRWPPPRVEPTPAP 542
P P G +A G P + G PPP + AP
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 340
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.22
Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Frame = +3
Query: 246 PWTPTKRRGPIAAEASSPGPAVVSLPS--LIGKPPPESRKPRAPAFTFGQKLDPLANIAK 419
P P K P+A S P P P G PPP P G P A
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 420 AGPGPASYNTEGMTAKGRALG-PAASLHGRWPPPRVEPTPAP 542
P P G +A G P + G PPP + AP
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 361
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.22
Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Frame = +3
Query: 246 PWTPTKRRGPIAAEASSPGPAVVSLPS--LIGKPPPESRKPRAPAFTFGQKLDPLANIAK 419
P P K P+A S P P P G PPP P G P A
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 420 AGPGPASYNTEGMTAKGRALG-PAASLHGRWPPPRVEPTPAP 542
P P G +A G P + G PPP + AP
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 346
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 32.3 bits (70), Expect = 0.29
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = +3
Query: 288 ASSPGPAVVSLPSLIGKP---PP--ESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTE 452
+S P V+ P + G P PP + PR P + +P + P P +Y E
Sbjct: 390 SSKPSGPVLPKPQVNGSPKKWPPVGTTSPPREPVNRLTEPDEP----STYTPKPIAYEPE 445
Query: 453 GMTAKGRALGPAASLHGRWPPPRVEPTP 536
M K A+ PA S PP EP P
Sbjct: 446 PMVYKPEAMKPAVSYDAYEEPP-AEPAP 472
>U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe
chromosome segregationprotein) homolog protein 1
protein.
Length = 307
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 204 QSISCETPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 374
QS + ++ + V + PT RR P+ SS PA S P+ P P +KP PA
Sbjct: 200 QSFNADSSI-VEEASTIPTNRRAPMLIAPSST-PAGPSKPTARKPPTPRFKKPSTPA 254
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 31.1 bits (67), Expect = 0.66
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 276 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLAN-IAKAGPGPASYNTE 452
+AA A +P P V + P+L P APAF P+A+ + A P A+ +
Sbjct: 75 LAAPAFAPAPVVAAAPALAPAYAPAPVVAAAPAFAPAYAPAPVASPMIAAAPALAAASIN 134
Query: 453 GM-TAKGRALGPA 488
G+ A A PA
Sbjct: 135 GLPVAAAPAFAPA 147
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 31.1 bits (67), Expect = 0.66
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = +3
Query: 135 TARSVTADFRKSGLTHASSLLVKQSISCETPMGVRQNPWTPTKRRGPIAAEASSPGPAVV 314
+ RS +K T A+ + + P V+Q P P P A + PGPA V
Sbjct: 34 STRSTRTTTQKRSSTKAADQ--QPAAPAPAPASVQQQPEAPAP--APTAPDVQQPGPAPV 89
Query: 315 SLPSLIGKPPPESRKPR--APAFTFGQKLDPLANIAKAGPGPA 437
+P P + +P APA Q+ +A A P PA
Sbjct: 90 PVPEPAQLAPQSAPEPTPDAPAAAPVQETPQVAP-APETPAPA 131
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 30.7 bits (66), Expect = 0.87
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 234 VRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPE---SRKPRAPAFTFGQKLDPL 404
++Q+ R G + AE + P VS+P G PP + S + RA T Q+ +P
Sbjct: 206 LQQHQQQQQNRAGQLQAEQAFANPPTVSIPPQTGHPPQQTSASSQQRAQE-TMAQQTEPQ 264
Query: 405 ANIAKAGPGPAS---YNTEGMTAKGRAL 479
++I ++ + Y+T + GR L
Sbjct: 265 SHIRESPQKETNLEKYSTGELCLYGREL 292
>AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical
protein Y43C5A.4 protein.
Length = 218
Score = 30.7 bits (66), Expect = 0.87
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 273 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF 377
P+ + P PAV + KPPPE +P+ P F
Sbjct: 158 PVEPSPAPPVPAVPAAVEQEWKPPPEFERPKHPGF 192
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/93 (25%), Positives = 41/93 (44%)
Frame = +3
Query: 240 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAK 419
++P P +RR P +++ SP P PS K P R+ R+P+ + + P +
Sbjct: 432 KSPPAPRRRRSP--SQSKSPAPRRRRSPS---KSPQAPRRRRSPSGS--KSRSPRRRRSP 484
Query: 420 AGPGPASYNTEGMTAKGRALGPAASLHGRWPPP 518
A + + + R P++S R PPP
Sbjct: 485 AAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPPP 517
Score = 29.1 bits (62), Expect = 2.7
Identities = 26/103 (25%), Positives = 40/103 (38%)
Frame = +3
Query: 255 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 434
P +RR +A S P P PS P P+ P A ++ P A+ + P
Sbjct: 372 PARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPA-----RRRRSPSASKSPPAPKR 426
Query: 435 ASYNTEGMTAKGRALGPAASLHGRWPPPRVEPTPAPCDYEPNK 563
A ++ A R P+ S + P PR +P+ P +
Sbjct: 427 AKSRSKSPPAPRRRRSPSQS---KSPAPRRRRSPSKSPQAPRR 466
>Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical
protein F17B5.2 protein.
Length = 919
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 498 HGRWPPPRVEPTPAPCD 548
HG PPPR PTP PCD
Sbjct: 751 HGNRPPPR--PTPKPCD 765
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 29.9 bits (64), Expect = 1.5
Identities = 31/96 (32%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Frame = -3
Query: 547 SQGAGVGSTRGGGHRPCNEAAGPNARPLAVIPSVL*EAGPGPAFAILARGSSFCPKVKAG 368
S G G G GGG EAA P++ P P+ P PA A + P AG
Sbjct: 387 SSGGGGGGYSGGGGGG-GEAAPPSSPPADAAPAPPPAPEPVPAPAPAPEAAPVAPSADAG 445
Query: 367 --ALGFLDSGGG-LPI---REGRDTTAGPGLEASAA 278
A +GGG P R RD G A+ A
Sbjct: 446 GYAAAAAPAGGGSYPAKKRRVARDYAEGEAAPAAPA 481
>AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical
protein Y37H2A.1 protein.
Length = 477
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Frame = +3
Query: 162 RKSGLTHASSLLVKQSISCETPMGVRQNPWTPTKRRGP--------IAAEASSPGPAVVS 317
R SGL A S + +S + R PW P R+GP + G A +
Sbjct: 31 RDSGLNRAGSGSGGRPVSSTSNESWRNVPWGPPGRQGPAVHQHHQMVQVHTRRLGGAAPT 90
Query: 318 LPSLIGKPPPESRKPRAP 371
+ PPP R+P +P
Sbjct: 91 MHHSRPPPPPLDRRPMSP 108
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = +3
Query: 336 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGRALGPAASLHGRWPP 515
K PP + + PAF +A+I+ P G A G GP +
Sbjct: 66 KVPPSAGSGKMPAF------QSIASISTDRESPEDPGNSGYLASGAESGPKKTTSKPATT 119
Query: 516 PRVEPTPAPCDYEPNKAA 569
P EPT P + E K +
Sbjct: 120 PTPEPTTTPVEEEKVKVS 137
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = +3
Query: 336 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGRALGPAASLHGRWPP 515
K PP + + PAF +A+I+ P G A G GP +
Sbjct: 25 KVPPSAGSGKMPAF------QSIASISTDRESPEDPGNSGYLASGAESGPKKTTSKPATT 78
Query: 516 PRVEPTPAPCDYEPNKAA 569
P EPT P + E K +
Sbjct: 79 PTPEPTTTPVEEEKVKVS 96
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = +3
Query: 336 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGRALGPAASLHGRWPP 515
K PP + + PAF +A+I+ P G A G GP +
Sbjct: 25 KVPPSAGSGKMPAF------QSIASISTDRESPEDPGNSGYLASGAESGPKKTTSKPATT 78
Query: 516 PRVEPTPAPCDYEPNKAA 569
P EPT P + E K +
Sbjct: 79 PTPEPTTTPVEEEKVKVS 96
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = +3
Query: 336 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGRALGPAASLHGRWPP 515
K PP + + PAF +A+I+ P G A G GP +
Sbjct: 25 KVPPSAGSGKMPAF------QSIASISTDRESPEDPGNSGYLASGAESGPKKTTSKPATT 78
Query: 516 PRVEPTPAPCDYEPNKAA 569
P EPT P + E K +
Sbjct: 79 PTPEPTTTPVEEEKVKVS 96
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.0
Identities = 28/113 (24%), Positives = 46/113 (40%)
Frame = +3
Query: 222 TPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDP 401
T G+ + PT PIA +S+P A + P L P+ +P T +P
Sbjct: 41 TSRGIATTTFAPTSSDLPIAGSSSAPVIASSADPILPTSVVPQPSNEPSPG-TVAPSDEP 99
Query: 402 LANIAKAGPGPASYNTEGMTAKGRALGPAASLHGRWPPPRVEPTPAPCDYEPN 560
+ PGP + + + + + GP P P VEP+ D++P+
Sbjct: 100 SPS-GPPSPGPVNPSEDPQPSGPPSPGPVDPSED--PQPSVEPSE---DHQPS 146
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +3
Query: 231 GVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKP-PPESRKPRAPAFTFGQKLDPLA 407
G NP P K + EA +P P P G P PP P PA G+ P A
Sbjct: 127 GAPGNPGAPGKGAA-VPCEAKTPPPCK---PCPAGPPGPPGPDGPAGPAGPDGEAGSPAA 182
Query: 408 NIAKAGPGPA 437
PGP+
Sbjct: 183 PSPPGPPGPS 192
>U80451-2|AAB37837.1| 223|Caenorhabditis elegans Hypothetical
protein F11G11.5 protein.
Length = 223
Score = 29.1 bits (62), Expect = 2.7
Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 5/131 (3%)
Frame = +3
Query: 225 PMGVRQNPWTPTKRRGPI-----AAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQ 389
P Q P +P++ P + + + VS P G PPP + AP +
Sbjct: 32 PSAPEQQPTSPSRPPPPAGFVYPSTDIQNSSEVHVSAPVPAGPPPPHASAGPAPTMSSYD 91
Query: 390 KLDPLANIAKAGPGPASYNTEGMTAKGRALGPAASLHGRWPPPRVEPTPAPCDYEPNKAA 569
P A + P +Y G T G ++ + PP++ T P +
Sbjct: 92 MPPPSYQAAMSYPAAPTYG--GSTDPKYHNGGQPPIY--YQPPQITQTRLPQPAAIEQIV 147
Query: 570 RAVLDHAPAFS 602
RAV PA S
Sbjct: 148 RAVRIQNPAGS 158
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Frame = +3
Query: 246 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPP-----ESRKPRAPAFTFGQKLDPLAN 410
P PT + P P P + PS+I PPP E +K P G + +
Sbjct: 1360 PPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKNPLPTANNGHTDNGSDD 1419
Query: 411 IAKAGPGPASYNTEGM 458
I + P P S N M
Sbjct: 1420 IDRNVPTPPSQNQYSM 1435
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 28.7 bits (61), Expect = 3.5
Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Frame = +3
Query: 201 KQSISCETPMGVRQNPWTPTKRRGPIAA-----EASSPGPAVVSLPSLIGKPPPESRKPR 365
+ S S + R +P T P AA E +P PA S P+ + P P P+
Sbjct: 32 RSSRSTRSTKSSRSSPKTVPVTEQPAAAPPQQLEQPTPAPAPESAPAPVQCPEPTPEVPQ 91
Query: 366 APAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGRALGPAAS 494
P Q P+ I + P P T + + P +S
Sbjct: 92 QPT----QVSAPVQEITQGAPAPIPEPTPVTAEQPTPVDPLSS 130
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 28.7 bits (61), Expect = 3.5
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Frame = +3
Query: 288 ASSPGPAVVSLPSLIGKPPPESRKPR--------APAFTFGQKLDPLANIAKAGPGPASY 443
A +P AV S +++ K P S+ P APA G P AN AKA P A
Sbjct: 287 APAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEP-IAQK 345
Query: 444 NTEGMTAKGRALGPAASLHGRWPPPRVEPTPAPCDYEPNK 563
T G+ G A S P +PAP P +
Sbjct: 346 KT-----VGKVQGTAPSKPAPAAPASAATSPAPAPEAPRR 380
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 28.7 bits (61), Expect = 3.5
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Frame = +3
Query: 288 ASSPGPAVVSLPSLIGKPPPESRKPR--------APAFTFGQKLDPLANIAKAGPGPASY 443
A +P AV S +++ K P S+ P APA G P AN AKA P A
Sbjct: 287 APAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEP-IAQK 345
Query: 444 NTEGMTAKGRALGPAASLHGRWPPPRVEPTPAPCDYEPNK 563
T G+ G A S P +PAP P +
Sbjct: 346 KT-----VGKVQGTAPSKPAPAAPASAATSPAPAPEAPRR 380
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 28.7 bits (61), Expect = 3.5
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Frame = +3
Query: 288 ASSPGPAVVSLPSLIGKPPPESRKPR--------APAFTFGQKLDPLANIAKAGPGPASY 443
A +P AV S +++ K P S+ P APA G P AN AKA P A
Sbjct: 287 APAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEP-IAQK 345
Query: 444 NTEGMTAKGRALGPAASLHGRWPPPRVEPTPAPCDYEPNK 563
T G+ G A S P +PAP P +
Sbjct: 346 KT-----VGKVQGTAPSKPAPAAPASAATSPAPAPEAPRR 380
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 28.7 bits (61), Expect = 3.5
Identities = 30/108 (27%), Positives = 40/108 (37%)
Frame = +3
Query: 273 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTE 452
P+AA + P V++ P+ + PP P AP A + A P P
Sbjct: 50 PVAAPVLAAAPTVLAAPAPLLAPPAPLLAPPAPVLAAAPAFAAPAPVFAAPPAPVLAAPA 109
Query: 453 GMTAKGRALGPAASLHGRWPPPRVEPTPAPCDYEPNKAARAVLDHAPA 596
A + P A + + P V PA P A R VL APA
Sbjct: 110 PFLAP--PVPPVAPIVSAFAPRPVLAAPAFAP-APILAPRPVL-AAPA 153
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/65 (24%), Positives = 24/65 (36%)
Frame = +3
Query: 240 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAK 419
+ P T P + + P P S P + P ES+ P T +DP+ +
Sbjct: 575 EEPATEVPNPQPPSPPSPEPEPEPKSTPEPVTDGPNESQSTALPQQTTDAPVDPVTEASP 634
Query: 420 AGPGP 434
P P
Sbjct: 635 LNPQP 639
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.3 bits (60), Expect = 4.6
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +3
Query: 270 GPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGP--GPASY 443
GP A+ G A + P+ +G P PAF P ++GP G A+
Sbjct: 99 GPAFGGAAPIGGAYQAAPAFVGAAPVGGAYQSGPAFGGAA---PAGGAYQSGPAFGGAAP 155
Query: 444 NTEGMTAKGRALGPAASLHGRWPPPRVEPTPAPCDYEPNKAARAVLDHAPA 596
G G+A +A L G P + + AP E AA APA
Sbjct: 156 AVGGAYQAGQAAVESAPLGGAAPAGGYQAS-APAAVEAAPAAGGYQAAAPA 205
>AY347577-1|AAP97871.1| 322|Caenorhabditis elegans COLlagen
structural gene, probablya critical component of the
embryonically derived outerlayer of the L1 cuticle (31.8
kD) (col-59) protein.
Length = 322
Score = 28.3 bits (60), Expect = 4.6
Identities = 30/97 (30%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Frame = -3
Query: 580 RTARAALFGS*SQGAGVGSTRGG-GHRPCNEAAGPNARPLAVIPSVL*EAGPGPAFAILA 404
R RA FGS Q +GVG GG G P + G P V A P P
Sbjct: 74 RAKRAWQFGSWVQDSGVGGGAGGYGSGPADSGYGAQGTNNGYGPVV--NAEPEPQCCTCQ 131
Query: 403 RGSSFCPKVKA--GALGFLDSGGGLPIREGRDTTAGP 299
+G + P G G D G + G+D GP
Sbjct: 132 QGKAGPPGPPGDDGKDG-NDGSAGNDAKNGKDGGVGP 167
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 273 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 374
P A A + P V P + PPP + P APA
Sbjct: 353 PTPAPAPAEDPVVTPAPEELTTPPPPAPPPPAPA 386
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = -2
Query: 356 PRFWRRFTYKGRE---RYYGW 303
PR W + T KGRE R YGW
Sbjct: 645 PRHWNKLTDKGREAFRRIYGW 665
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 4.6
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +3
Query: 255 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 434
P + R I A +PGPA+ P+ P P Q +P + A P P
Sbjct: 1730 PVEHRYEIPAPGPAPGPALEPAPAPTSAPQIVEPLPPVQPLPQPQPTEPEEPLPIATPAP 1789
Query: 435 -ASYNTEGMTAKGRALGPAASLHGRWPPPRVEPTPAPCDYEP 557
+ +T G A+G + P + + P + AP + EP
Sbjct: 1790 QPTEHTYG--AQGPNIVPVVTA-APYVPQETQAPIAPSNPEP 1828
>AC006665-1|AAF39908.1| 322|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 14 protein.
Length = 322
Score = 28.3 bits (60), Expect = 4.6
Identities = 30/97 (30%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Frame = -3
Query: 580 RTARAALFGS*SQGAGVGSTRGG-GHRPCNEAAGPNARPLAVIPSVL*EAGPGPAFAILA 404
R RA FGS Q +GVG GG G P + G P V A P P
Sbjct: 74 RAKRAWQFGSWVQDSGVGGGAGGYGSGPADSGYGAQGTNNGYGPVV--NAEPEPQCCTCQ 131
Query: 403 RGSSFCPKVKA--GALGFLDSGGGLPIREGRDTTAGP 299
+G + P G G D G + G+D GP
Sbjct: 132 QGKAGPPGPPGDDGKDG-NDGSAGNDAKNGKDGGVGP 167
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/81 (25%), Positives = 27/81 (33%)
Frame = +3
Query: 297 PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGRA 476
P P + P PPP AP T P + A GP + A
Sbjct: 506 PPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGA 565
Query: 477 LGPAASLHGRWPPPRVEPTPA 539
+ S+ G PPP P P+
Sbjct: 566 VAGLKSVPGGPPPPPPPPPPS 586
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 580 RTARAALFGS*SQGAGVGSTRGGGHRPCNEAAGPNARPLAVIPSV-L*EAGPGPA 419
+ +R ALF S +QG GV S PN R AV+P+ + G PA
Sbjct: 1036 KASRDALFASLNQGEGVTSRLKKVTADMQTHKNPNLRGTAVVPAAGASQGGSSPA 1090
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 580 RTARAALFGS*SQGAGVGSTRGGGHRPCNEAAGPNARPLAVIPSV-L*EAGPGPA 419
+ +R ALF S +QG GV S PN R AV+P+ + G PA
Sbjct: 275 KASRDALFASLNQGEGVTSRLKKVTADMQTHKNPNLRGTAVVPAAGASQGGSSPA 329
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 255 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF 377
P + AS+P + SLP+ +P P+SR+ P +
Sbjct: 47 PEPIHNTLNTSASTPSSSAASLPTTPDEPVPDSRRAVLPRY 87
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 240 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKP 362
+ P TP+ P+ + SSP P +V P+ P ++ KP
Sbjct: 522 EKPVTPSPSASPLPSPVSSPAPQLVQKPT----TPTDASKP 558
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +3
Query: 339 PPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGRALGPAASLHGRWPPP 518
P P S P A G +P N+ ++ P P M A G + P+AS + PPP
Sbjct: 190 PYPPSSTPYPSAGAMGY--NPYMNVPQSTPYP-------MGASGASPYPSASSNPAPPPP 240
Query: 519 RVEPTPA 539
R P A
Sbjct: 241 RPPPVTA 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,508,768
Number of Sequences: 27780
Number of extensions: 310833
Number of successful extensions: 1317
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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