Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9i14
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49449-1|AAB00117.1|  339|Caenorhabditis elegans olfactory recep...    29   2.8  
U42830-6|AAC48279.2|  339|Caenorhabditis elegans Odorant respons...    29   2.8  
Z81139-7|CAI46624.1|  358|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF039037-5|AAC48228.3|  714|Caenorhabditis elegans Temporarily a...    27   8.6  
AF038608-14|AAT92087.1|  314|Caenorhabditis elegans Serpentine r...    27   8.6  

>U49449-1|AAB00117.1|  339|Caenorhabditis elegans olfactory receptor
           Odr-10 protein.
          Length = 339

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +2

Query: 332 WSTWKHFIQTSWVYLILQFAISEIIRKTKLTCLKHWYIISSIMFVLIYWGW 484
           W   ++    ++VY   +  +  I  K  L C  H++++S    V+ Y G+
Sbjct: 174 WIKKENVSYIAYVYYQYENGVRHIYLKNLLGCFVHYFVMSMTFVVMFYCGY 224


>U42830-6|AAC48279.2|  339|Caenorhabditis elegans Odorant response
           abnormal protein10 protein.
          Length = 339

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +2

Query: 332 WSTWKHFIQTSWVYLILQFAISEIIRKTKLTCLKHWYIISSIMFVLIYWGW 484
           W   ++    ++VY   +  +  I  K  L C  H++++S    V+ Y G+
Sbjct: 174 WIKKENVSYIAYVYYQYENGVRHIYLKNLLGCFVHYFVMSMTFVVMFYCGY 224


>Z81139-7|CAI46624.1|  358|Caenorhabditis elegans Hypothetical
           protein W05H5.5 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +2

Query: 368 VYLILQFAISEIIRKTKLTCLKH--WYIISSIMFVLIYWGWKPLIIILMQPVIFSTIIFL 541
           +Y++   A++  +  T    L H   YI+S  +F L Y      +II+   + F  I   
Sbjct: 39  LYILCSQAVNAYVHVTLKIRLFHRNLYILSIPVFFLWYVLIAGKLIIIAYRLDFLKIDIP 98

Query: 542 GGKKTSIWLTSIVLLMSYNSL 604
            G+ T IW   I  +++ N+L
Sbjct: 99  IGEHTDIWTDDIGKMLNVNNL 119


>AF039037-5|AAC48228.3|  714|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 40 protein.
          Length = 714

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/60 (23%), Positives = 31/60 (51%)
 Frame = +2

Query: 452 SIMFVLIYWGWKPLIIILMQPVIFSTIIFLGGKKTSIWLTSIVLLMSYNSLKYKYYFWNF 631
           +I +V+ ++    L + LM P++  +   +GG    ++ + + L+ S     Y+ +FW F
Sbjct: 423 NICYVISWYLATDLQLYLMSPILLLSFA-IGGAVFGLFASVVALVASTAFNAYQIFFWYF 481


>AF038608-14|AAT92087.1|  314|Caenorhabditis elegans Serpentine
           receptor, class z protein83 protein.
          Length = 314

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +2

Query: 392 ISEIIRKTKLTCLKHWYIISSIMFVLIYWGWKPLIIILMQPVIFSTIIFLGG 547
           I   +RK       H+YI+   +F    W     +I    P+IFSTI  L G
Sbjct: 203 IMRSVRKNAYVTSGHYYILQKYIF----WQAVTALIFESFPIIFSTIQLLHG 250


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,374,429
Number of Sequences: 27780
Number of extensions: 297652
Number of successful extensions: 842
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)