Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9i09
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 41 8e-04
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 38 0.005
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 37 0.009
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 34 0.065
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 34 0.065
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 34 0.065
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 34 0.065
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 33 0.15
Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical p... 33 0.15
U80025-2|AAD32270.3| 806|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.20
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.20
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 33 0.20
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 31 0.46
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 31 0.46
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 1.9
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 29 1.9
Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical pr... 29 2.4
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 29 2.4
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF040655-1|AAK84577.2| 678|Caenorhabditis elegans Hypothetical ... 29 2.4
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 29 3.2
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 3.2
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 3.2
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 29 3.2
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 3.2
Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 28 4.3
Z49868-4|CAA90030.1| 184|Caenorhabditis elegans Hypothetical pr... 28 4.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF042389-1|AAC08940.1| 184|Caenorhabditis elegans FMRFamide-lik... 28 4.3
Z81556-3|CAB04521.2| 364|Caenorhabditis elegans Hypothetical pr... 28 5.7
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 28 5.7
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 28 5.7
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 28 5.7
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 28 5.7
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 28 5.7
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF003130-13|AAK73876.1| 220|Caenorhabditis elegans Hypothetical... 28 5.7
AC024202-5|AAP86609.1| 827|Caenorhabditis elegans C. elegans AP... 28 5.7
AC024202-3|AAF36038.2| 955|Caenorhabditis elegans C. elegans AP... 28 5.7
AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical ... 28 5.7
AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical ... 28 5.7
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 7.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81539-3|CAB04391.1| 218|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 27 9.9
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 27 9.9
U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical pr... 27 9.9
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 27 9.9
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAG-FGSTTPA 200
G AT TS + GLFGST+A PA + T G FGS+TPA
Sbjct: 350 GGLFGATTAAAAAPTSSTTGGLFGSTAAAPAASLPTGGLFGSSTPA 395
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = +3
Query: 84 TPGFGMTATSQPSTGLFGSTSATPAPA--FGTAGFGSTTPA---FGSTTTP 221
T G ++T+ PS+GLFGST+A AP FG+ + P+ FGS+ P
Sbjct: 155 TGGLFGSSTAAPSSGLFGSTAAPAAPGGLFGSTSTSTAAPSGGLFGSSAAP 205
Score = 34.3 bits (75), Expect = 0.065
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = +3
Query: 93 FGMTATSQPSTGLFGS--TSATPAPAFGTAGFGSTTPA---FGSTTTP 221
FG + P+ GLFGS ++AT AP G G + P+ FGST P
Sbjct: 130 FGANKPAAPTGGLFGSSTSTATTAPTGGLFGSSTAAPSSGLFGSTAAP 177
Score = 31.5 bits (68), Expect = 0.46
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Frame = +3
Query: 78 PATPG-FGMTATSQP---STGLFGSTSATPAPAFGTAGFGSTTPAFGS 209
PA+ G FG + + P ST +FGS++ + APA T FG++ P+ G+
Sbjct: 82 PASAGIFGNSGAAAPAPASTSIFGSSANSAAPA--TVTFGASAPSAGA 127
Score = 31.5 bits (68), Expect = 0.46
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 69 NRIPATPGFGMTA--TSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTT 218
N P + FG +A + S GLFG+ AP+ G FGST PA + TT
Sbjct: 225 NAAPTSGLFGNSAPAATASSGGLFGAAPKPAAPSGGL--FGSTAPATTAATT 274
Score = 31.1 bits (67), Expect = 0.61
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 9/98 (9%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTGLFG-STSATPAPA----FGTAGFGSTTPAFGSTTTPXXX 230
G+ P+T G+ S + +FG S++A PAPA FG +G + PA S
Sbjct: 50 GSAQPSTGSTGLFGNSTATGSMFGGSSAAAPAPASAGIFGNSGAAAPAPASTSIFGSSAN 109
Query: 231 XXXXXXXXXXXXXXXXXXXXFGANS-AAP---VFGTTT 332
FGAN AAP +FG++T
Sbjct: 110 SAAPATVTFGASAPSAGAGMFGANKPAAPTGGLFGSST 147
Score = 31.1 bits (67), Expect = 0.61
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 78 PATPGFGMTATSQPSTGLFGSTS-ATPAPAFGTAGFGSTTPAFGSTTTP 221
P++ FG TA GLFGSTS +T AP+ G FGS+ + P
Sbjct: 166 PSSGLFGSTAAPAAPGGLFGSTSTSTAAPSGGL--FGSSAAPTSTAPAP 212
Score = 31.1 bits (67), Expect = 0.61
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Frame = +3
Query: 72 RIPATPGFGM------TATSQPSTG-LFGSTSATPAPAFGTAGFGSTTPAFG--STTTP 221
+ PA P G+ T TS P+TG LFG+ AT A A ST FG STTTP
Sbjct: 396 KTPAAPTAGLFGASSTTTTSAPATGSLFGTAPAT-TTATSAAPAASTGGLFGASSTTTP 453
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 10/51 (19%)
Frame = +3
Query: 96 GMTATSQPSTGLFGSTSATP--------APAFGTAG--FGSTTPAFGSTTT 218
G + S PS GLFG++SA+ APA + G FG+TT A + T+
Sbjct: 315 GAASASTPSVGLFGNSSASTTAAAAPATAPAAASTGGLFGATTAAAAAPTS 365
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 105 ATSQPSTGLFGSTSATPAPAFGTAG-FGSTT 194
A S P+ GLFGS++ PA TAG FG+++
Sbjct: 380 AASLPTGGLFGSSTPAKTPAAPTAGLFGASS 410
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTTP 221
G+ PAT TATS GLFG+ ++ P+ A T G FG++T P
Sbjct: 263 GSTAPATTAATTTATS----GLFGAPTSAPSSAPATGGL------FGASTAP 304
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 93 FGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPA 200
FG S STGLFG+++AT FG + + PA
Sbjct: 49 FGSAQPSTGSTGLFGNSTAT-GSMFGGSSAAAPAPA 83
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 78 PATPGFGMTATSQPSTGLFG-STSATPAPAFGTAG-FGSTTPAFGSTTTP 221
PAT A + + GLFG S++ TPA T G FG+ T + P
Sbjct: 427 PATTTATSAAPAASTGGLFGASSTTTPASTAPTGGLFGAATTTAPAAAAP 476
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 37.9 bits (84), Expect = 0.005
Identities = 32/87 (36%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +3
Query: 90 GFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGS-TTTPXXXXXXXXXXXXXXX 266
G TA + S GLFGST+A P PA S+ P FGS TTT
Sbjct: 46 GASQTAPAPASAGLFGSTTA-PTPA-----STSSVPLFGSTTTTASPSGGLFGAKTATTA 99
Query: 267 XXXXXXXXFGANSAAP----VFGTTTP 335
FGA++AAP +FG+T P
Sbjct: 100 APAPTGGLFGASTAAPATGSLFGSTAP 126
Score = 32.7 bits (71), Expect = 0.20
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 111 SQPSTGLFGST---SATPAPAFGTAGFGSTTPAFGSTTT 218
SQ S + GS+ A PAPA G G G+ T FG+T T
Sbjct: 429 SQSSLAIIGSSLRAPAAPAPAVGGLGLGTGTSLFGNTGT 467
Score = 31.1 bits (67), Expect = 0.61
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Frame = +3
Query: 54 SKIGGNRIPATPG--FGMTATSQPSTG-LFGSTSATPAPAFGTAGFGSTTPA-----FGS 209
+K PA G FG +T+ P+TG LFGST+ FG S P FGS
Sbjct: 93 AKTATTAAPAPTGGLFG-ASTAAPATGSLFGSTAPATGGLFGAKSTTSAAPTLGGGLFGS 151
Query: 210 TTTP 221
+T P
Sbjct: 152 STAP 155
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 93 FGMTATSQPSTG--LFGSTSATPAPAFGTAGFGSTTPAFGST 212
FG TAT +G LFG+T++T + TT FGST
Sbjct: 471 FGSTATKPAFSGGSLFGATTSTATSSAAATTTTPTTSLFGST 512
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 37.1 bits (82), Expect = 0.009
Identities = 30/92 (32%), Positives = 34/92 (36%)
Frame = -1
Query: 355 GAVEPKAGVVVPNTGAAELAPKAGVEPKPGVLVVPKAGVVDAPKAGVVVEPNAGVVEPKP 176
G+ K V + E AP A EP P P AP+A EP A P P
Sbjct: 457 GSYPAKKRRVARDYAEGEAAPAAPAEPAPA----PAPAPAPAPEAAPAPEP-APAPAPAP 511
Query: 175 AVPNAGAGVADVLPKRPVDG*DVAVMPNPGVA 80
A A A D P P +VA P P A
Sbjct: 512 APEAAPAAAPDAAPAEPAPVPEVAPAPAPAPA 543
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 34.3 bits (75), Expect = 0.065
Identities = 23/80 (28%), Positives = 30/80 (37%)
Frame = -1
Query: 319 NTGAAELAPKAGVEPKPGVLVVPKAGVVDAPKAGVVVEPNAGVVEPKPAVPNAGAGVADV 140
+T A P A P P +P+A P G + NA P P +P GAG
Sbjct: 190 STSAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPP 249
Query: 139 LPKRPVDG*DVAVMPNPGVA 80
P P +A P +A
Sbjct: 250 PPPPPPPAQLMASSGTPSLA 269
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 34.3 bits (75), Expect = 0.065
Identities = 23/80 (28%), Positives = 30/80 (37%)
Frame = -1
Query: 319 NTGAAELAPKAGVEPKPGVLVVPKAGVVDAPKAGVVVEPNAGVVEPKPAVPNAGAGVADV 140
+T A P A P P +P+A P G + NA P P +P GAG
Sbjct: 176 STSAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPP 235
Query: 139 LPKRPVDG*DVAVMPNPGVA 80
P P +A P +A
Sbjct: 236 PPPPPPPAQLMASSGTPSLA 255
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 34.3 bits (75), Expect = 0.065
Identities = 23/80 (28%), Positives = 30/80 (37%)
Frame = -1
Query: 319 NTGAAELAPKAGVEPKPGVLVVPKAGVVDAPKAGVVVEPNAGVVEPKPAVPNAGAGVADV 140
+T A P A P P +P+A P G + NA P P +P GAG
Sbjct: 176 STSAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPP 235
Query: 139 LPKRPVDG*DVAVMPNPGVA 80
P P +A P +A
Sbjct: 236 PPPPPPPAQLMASSGTPSLA 255
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 34.3 bits (75), Expect = 0.065
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +3
Query: 54 SKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTT 215
S G + T G T T+ P+TG GST P+ T+ ST P STT
Sbjct: 888 SSTSGTTVVTTQGSSSTQTN-PNTGSTGSTVTQPSAFSSTSASSSTQPIASSTT 940
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 54 SKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTTP 221
S G T G T T+ +TG GST P + T+G ST P ST P
Sbjct: 832 SSTSGQTAVTTQGSSSTQTNS-NTGSTGSTVTNPPVSSSTSGSSSTQPIASSTANP 886
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 54 SKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTTP 221
S +G + + +T + +++ +TG GST + T G ST P ST P
Sbjct: 776 STVGSSTMGSTQS-SLPSSTMTNTGSTGSTVTNQLASSSTYGASSTEPIASSTANP 830
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 33.1 bits (72), Expect = 0.15
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTG---LFGSTSATPAPAFGTAGFGSTTPA-FGSTTTPXXXX 233
G+ P F + P+T LFGST+ + P FG+ S+TP+ FG+T T
Sbjct: 5 GSSTPQKQAFTFPTPNAPTTSSGTLFGSTTPSK-PLFGSTAQASSTPSLFGTTNTSTPSG 63
Query: 234 XXXXXXXXXXXXXXXXXXXFGANSAAPVFGTTTP 335
FG AAP T TP
Sbjct: 64 GLFGKTGTSTTTTSTAGTLFG---AAPTTSTATP 94
Score = 29.5 bits (63), Expect = 1.9
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 17/63 (26%)
Frame = +3
Query: 81 ATPG-FGMTATSQPSTGLFG------STSATPAPAFGTAG---------FG-STTPAFGS 209
+TP FG T TS PS GLFG +T++T FG A FG STT FG+
Sbjct: 48 STPSLFGTTNTSTPSGGLFGKTGTSTTTTSTAGTLFGAAPTTSTATPSLFGASTTGLFGT 107
Query: 210 TTT 218
++T
Sbjct: 108 SST 110
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 81 ATP-GFGMTATSQPSTGLFGSTSATPAPA--FGTAGFGSTTPAFGST 212
+TP G T T+ ST LFGS++A PA FG++ GST G+T
Sbjct: 194 STPFGAASTGTAAGST-LFGSSTAKPATGGFFGSSS-GSTLGGLGAT 238
>Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical
protein K07F5.13b protein.
Length = 549
Score = 33.1 bits (72), Expect = 0.15
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTG---LFGSTSATPAPAFGTAGFGSTTPA-FGSTTTPXXXX 233
G+ P F + P+T LFGST+ + P FG+ S+TP+ FG+T T
Sbjct: 5 GSSTPQKQAFTFPTPNAPTTSSGTLFGSTTPSK-PLFGSTAQASSTPSLFGTTNTSTPSG 63
Query: 234 XXXXXXXXXXXXXXXXXXXFGANSAAPVFGTTTP 335
FG AAP T TP
Sbjct: 64 GLFGKTGTSTTTTSTAGTLFG---AAPTTSTATP 94
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 54 SKIGGNRIPATP-GFGMTATSQPSTGLFGSTSATPAPA--FGTAGFGSTTPAFGST 212
S G + +TP G T T+ ST LFGS++A PA FG++ GST G+T
Sbjct: 95 SLFGASTTGSTPFGAASTGTAAGST-LFGSSTAKPATGGFFGSSS-GSTLGGLGAT 148
>U80025-2|AAD32270.3| 806|Caenorhabditis elegans Hypothetical
protein F02C9.2 protein.
Length = 806
Score = 32.7 bits (71), Expect = 0.20
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 323 NHYTGLRFNGSYFWYRDFSIWDNY 394
NH T L N SY W D +IWD +
Sbjct: 725 NHQTSLSGNSSYLWGNDRNIWDTF 748
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 78 PATPGFGMT-ATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTT 218
P GFG T A S+ G F + AFG AGFGS++ FG+ T
Sbjct: 505 PQDQGFGDTDAPSKSGLGSFNTGGGAVKSAFGAAGFGSSS-NFGNGNT 551
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 78 PATPGFGMT-ATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTT 218
P GFG T A S+ G F + AFG AGFGS++ FG+ T
Sbjct: 505 PQDQGFGDTDAPSKSGLGSFNTGGGAVKSAFGAAGFGSSS-NFGNGNT 551
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.20
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 16/94 (17%)
Frame = -1
Query: 352 AVEPKAGVVVPNTGA----AELAPKAGVEPKPGV------LVVPKAGVVDA------PKA 221
A PKA VV P A A +AP A V+PKP V P+A V A +A
Sbjct: 252 APSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPNFGKPRAAVAPARAPQITQRA 311
Query: 220 GVVVEPNAGVVEPKPAVPNAGAGVADVLPKRPVD 119
P + P PN A P++P++
Sbjct: 312 PAATRPATSAIRVIPIAPNVVRNGAPAAPRKPIE 345
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 51 ISKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTTP 221
+S I G+ + +TP ++ P+T +T++ P S TP+ G+TT P
Sbjct: 525 LSTITGSIVTSTPTMAPQTSASPTTTPTHTTASQPTTTKPVVTTNSVTPSTGTTTVP 581
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 31.5 bits (68), Expect = 0.46
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = -1
Query: 322 PNTGAAELAPKAGVEPKPGVLVVPKAGVVDAPKAGVVVEPNAGVVEPKPAVPNAGAGVAD 143
P + P PKP V P PK P PKPAV A A V
Sbjct: 296 PKPVPQQTPPVQQAPPKPAVQQAPTRAAPAPPKPAPQQAPPVQQNPPKPAVQQAQAPVVQ 355
Query: 142 VLPKRPV 122
P PV
Sbjct: 356 QAPAPPV 362
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 31.5 bits (68), Expect = 0.46
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 93 FGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTTP 221
FG +T+ P +FG S++ PAF T+ ST+ ST TP
Sbjct: 1040 FGGASTNPP---MFGGPSSSSIPAFSTSNSSSTSGFPSSTATP 1079
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 96 GMTATSQPSTGLFGSTSATPAPAFGTAGFG-STTPAFGS 209
G TAT+QPS FG + T T FG S PA S
Sbjct: 729 GSTATTQPSAFAFGLSKTTEVAPTSTPAFGLSAKPAVSS 767
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 63 GGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGS 209
GG + P F + +S ST F S++ATP FG AG ST+ FG+
Sbjct: 1051 GGPSSSSIPAFSTSNSS--STSGFPSSTATP---FGNAGTTSTSGVFGA 1094
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 31.1 bits (67), Expect = 0.61
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 78 PATPGFGMTATSQPSTGLF--GSTSATPAPAFGTAGFGSTTPA 200
PAT GF A+ Q ++ LF G+T T FG G +TTPA
Sbjct: 1326 PATGGFAQFASGQKTSSLFGGGATPQTNTSIFG--GGANTTPA 1366
>Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical
protein F49C5.7 protein.
Length = 255
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 27 FKCFPFLEISKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTT--PA 200
F CF F K+ G I T + T QPST ++S+ T + T P+
Sbjct: 7 FSCFHF---KKVYGTTIYTTVARRLKTTIQPSTSTTATSSSATETTSNTDSSSTATPSPS 63
Query: 201 FGSTTTP 221
S+TTP
Sbjct: 64 SASSTTP 70
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 60 IGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGST 212
+G + + AT +++++ P+TG GST P+ + T+G ST ST
Sbjct: 1532 VGSSTVGATQT-SVSSSTVPNTGSTGSTVTNPSTSSSTSGSSSTQSIPSST 1581
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +3
Query: 39 PFLEISKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTT 218
P S +G ++P +++TS PS+ G+TS+ + G++ G+T + S+T
Sbjct: 1492 PIASSSTMGSTAGSSSPQPTVSSTSVPSST--GATSSGSSTTVGSSTVGATQTSVSSSTV 1549
Query: 219 P 221
P
Sbjct: 1550 P 1550
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 8/75 (10%)
Frame = -1
Query: 343 PKAGVVVPNTGAAELAPKA---GVEPKPGVLVVPKAGVVD-----APKAGVVVEPNAGVV 188
P A P AE AP A G +P P A AP+A E G
Sbjct: 358 PDAAAAAPEAAPAEAAPAAEGAGGGAEPAGAAAPDAAAAAPEAAAAPEAAPAAEGAGGGA 417
Query: 187 EPKPAVPNAGAGVAD 143
EP A P A A +
Sbjct: 418 EPAGAAPEAAAAAPE 432
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Frame = -1
Query: 343 PKAGVVVPNTG--AAELAPKAGVEPKPGVLVVPKAGVVD---AP-KAGVVVEPNAGVVEP 182
P+A P AA A AG +P P A AP +A E G EP
Sbjct: 294 PEAAAAAPEAAPEAAPAAEGAGGGAEPAGAAAPDAAAAAPEAAPAEAAPAAEGAGGGAEP 353
Query: 181 KPAVPNAGAGVADVLP 134
A P+A A + P
Sbjct: 354 AGAAPDAAAAAPEAAP 369
>Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical
protein R13H4.2a protein.
Length = 225
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 356 YFWYRDFSIWDNYNTGFWYRHCWVKF*PWIKYFRWFWDTASY-YINYWVGSEFWSWYSNY 532
Y W RD+ ++D+Y WY + F P Y ++ + Y Y +Y +W+ Y +Y
Sbjct: 63 YRWRRDWDLYDDY----WYDK-YYYFSP--LYRSTYYPSRRYSYSDYLPNPYYWNNYGSY 115
Query: 533 PNRVWT-IGSHWYSH 574
WT +WY +
Sbjct: 116 ----WTRYKGYWYDY 126
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 99 MTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTTP 221
+T S STG GS++A + + GST P +T TP
Sbjct: 40 VTGASSDSTGSTGSSAAPGSTVTDGSNTGSTAPVPSTTPTP 80
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 99 MTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTTP 221
+T S STG GS++A + + GST P +T TP
Sbjct: 43 VTGASSDSTGSTGSSAAPGSTVTDGSNTGSTAPVPSTTPTP 83
>AF040655-1|AAK84577.2| 678|Caenorhabditis elegans Hypothetical
protein T24E12.5 protein.
Length = 678
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/46 (45%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 268 GVLVVPKAGVVDAPKAGVVVEPNAGVVEPKPAVPNAGA-GVADVLP 134
G V AGVV A AG AGVV A AGA G+ VLP
Sbjct: 30 GAGVASAAGVVAASAAGTGAASTAGVVAASAAGVGAGAVGLTLVLP 75
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -1
Query: 310 AAELAPKAGVEPKPGVLVVPKAGVVDAPKAGVVVEPNAGV 191
+A A AGV GV+ AG A AGVV AGV
Sbjct: 24 SAASATGAGVASAAGVVAASAAGTGAASTAGVVAASAAGV 63
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = -1
Query: 259 VVPKAGVVDAPKAGVVVEPNAGVVEPKPAVPNAGAGVADVLPKRPVDG*DVAVMPNP 89
++P +A AG++V V+E + N+ P+ + G D PNP
Sbjct: 373 IIPAIASTNAIVAGIIVTEAVRVIEGSTVICNSSIATTQSNPRGRIFGGDATNPPNP 429
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 54 SKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAF-GTAGFGSTTPAFGS 209
S GG +P G ++ ST G S + AF G+ GFG + FGS
Sbjct: 82 SGFGGGSTGGSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGSATGFGS 134
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 54 SKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAF-GTAGFGSTTPAFGS 209
S GG +P G ++ ST G S + AF G+ GFG + FGS
Sbjct: 82 SGFGGGSTGGSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGSATGFGS 134
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 78 PATPGFGMTATSQPSTGLFGSTSATPAPAFG-TAGFGSTTPAFGST 212
P T G G T STG+ ++ T A F G +TPA G T
Sbjct: 564 PVTGGTGGTMGPMGSTGVTQASPVTGATGFTMPTGISQSTPAIGGT 609
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +3
Query: 78 PATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGST 212
P T G G T T+ + L + TP P T G G T GST
Sbjct: 537 PVTGGTGPTETTGVTMPLGSTWMTTPTPV--TGGTGGTMGPMGST 579
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 54 SKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAF-GTAGFGSTTPAFGS 209
S GG +P G ++ ST G S + AF G+ GFG + FGS
Sbjct: 82 SGFGGGSTGGSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGSATGFGS 134
>Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical
protein K07F5.13a protein.
Length = 612
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 81 ATP-GFGMTATSQPSTGLFGSTSATPAPA--FGTAGFGSTTPAFGST 212
+TP G T T+ ST LFGS++A PA FG++ GST G+T
Sbjct: 167 STPFGAASTGTAAGST-LFGSSTAKPATGGFFGSSS-GSTLGGLGAT 211
>Z49868-4|CAA90030.1| 184|Caenorhabditis elegans Hypothetical
protein W07E11.2 protein.
Length = 184
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQP-STGLFGSTSATPAPAFGTAGFGSTTP 197
GN T FG +P T FG SA + FGT FG P
Sbjct: 132 GNAPFGTMKFGKREAEEPLGTMRFGKRSADDSAPFGTMRFGKRNP 176
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +3
Query: 54 SKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTT 215
S +G +T G T+T STG GSTS+ T STT + S T
Sbjct: 1818 SSVGSTVASSTAGLVSTSTVPSSTGTMGSTSS--GTVGSTISESSTTASASSQT 1869
>AF042389-1|AAC08940.1| 184|Caenorhabditis elegans FMRFamide-like
peptide 3 protein.
Length = 184
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQP-STGLFGSTSATPAPAFGTAGFGSTTP 197
GN T FG +P T FG SA + FGT FG P
Sbjct: 132 GNAPFGTMKFGKREAEEPLGTMRFGKRSADDSAPFGTMRFGKRNP 176
>Z81556-3|CAB04521.2| 364|Caenorhabditis elegans Hypothetical
protein F58G1.3 protein.
Length = 364
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 173 CRFWFDNTGIWFDYYTCFRCIDHSGL 250
C++ + G+W+D+ TCF + SGL
Sbjct: 169 CQYKY-GVGLWWDFQTCFNRMPMSGL 193
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 152 SSRCTPKKAC*WLRCCSHAKSWGCRYTV 69
S C +K W R C H + W C YTV
Sbjct: 432 SKECKRRK---WQRDCVHGQLWKCYYTV 456
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAG 179
GN + PG +T+ + P G+ GSTS T G
Sbjct: 13 GNLLEDDPGSSVTSATSPFAGINGSTSTALTSQVPTVG 50
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAG 179
GN + PG +T+ + P G+ GSTS T G
Sbjct: 13 GNLLEDDPGSSVTSATSPFAGINGSTSTALTSQVPTVG 50
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAG 179
GN + PG +T+ + P G+ GSTS T G
Sbjct: 13 GNLLEDDPGSSVTSATSPFAGINGSTSTALTSQVPTVG 50
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAG 179
GN + PG +T+ + P G+ GSTS T G
Sbjct: 13 GNLLEDDPGSSVTSATSPFAGINGSTSTALTSQVPTVG 50
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 81 ATPGFGMTATSQ--PSTGLFGSTSATPAPAFG--TAGFGSTTPAFGSTTT 218
+TP +T+T++ PST TS T P T+G ST+ + STTT
Sbjct: 925 STPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATSTSSSTESTTT 974
>AF003130-13|AAK73876.1| 220|Caenorhabditis elegans Hypothetical
protein F55A12.10 protein.
Length = 220
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 143 CTPKKAC*WLRCCSHAKSWGCRYTVTANF 57
C+P K ++ CSH CR T TA+F
Sbjct: 11 CSPSKRQFFITACSHVFCETCRTTPTADF 39
>AC024202-5|AAP86609.1| 827|Caenorhabditis elegans C. elegans APB-1
protein, isoform c protein.
Length = 827
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 60 IGGNRIPATPGFGMTATSQPSTGLFGSTSATPA--PAFGTAGFGSTTPAFGS 209
+GG+ +PA P +A+ P GL G A PA P+ A G FGS
Sbjct: 668 LGGDPMPAAP--TNSASYNPFDGLGGLGGAAPAAPPSQQPASIGGLAEIFGS 717
>AC024202-3|AAF36038.2| 955|Caenorhabditis elegans C. elegans APB-1
protein, isoform a protein.
Length = 955
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 60 IGGNRIPATPGFGMTATSQPSTGLFGSTSATPA--PAFGTAGFGSTTPAFGS 209
+GG+ +PA P +A+ P GL G A PA P+ A G FGS
Sbjct: 668 LGGDPMPAAP--TNSASYNPFDGLGGLGGAAPAAPPSQQPASIGGLAEIFGS 717
>AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical
protein Y45G12C.11 protein.
Length = 779
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 323 NHYTGLRFNGSYFWYRDFSIWD 388
N T L N SY W D +IWD
Sbjct: 702 NFQTSLSGNSSYLWDNDRNIWD 723
>AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical
protein F56A4.6 protein.
Length = 796
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 323 NHYTGLRFNGSYFWYRDFSIWD 388
N T L N SY W D +IWD
Sbjct: 719 NFQTSLSGNSSYLWDNDRNIWD 740
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 99 MTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTT 218
+T T+ P+T ST+ T P T +TT + STTT
Sbjct: 59 VTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTT 98
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical protein
K08E4.1 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAF-GSTTTP 221
GN TP +G ++ T +GST PA+G+ S TPA+ S TP
Sbjct: 871 GNDSSRTPAYGSADGAR--TPAYGSTEGGRTPAYGSMD-NSRTPAYDDSGRTP 920
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical protein
K08E4.1 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 66 GNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAF-GSTTTP 221
GN TP +G ++ T +GST PA+G+ S TPA+ S TP
Sbjct: 871 GNDSSRTPAYGSADGAR--TPAYGSTEGGRTPAYGSMD-NSRTPAYDDSGRTP 920
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 63 GGNRIPATPGFGMTATSQPSTGLFGSTSAT----PAPAFGTAGFGSTTPAFG 206
G N PATP +A++QP T S S T PA G + GS P+ G
Sbjct: 602 GANTQPATP----SASNQPPTPASASASTTLHVEPASVAGGSQAGSRAPSAG 649
>Z81539-3|CAB04391.1| 218|Caenorhabditis elegans Hypothetical
protein F46A8.5 protein.
Length = 218
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 42 FLEISKIGGNRIPATPGFGMTATSQPS 122
FL+ GGN PA F +T +QPS
Sbjct: 149 FLQGDTYGGNPFPAGANFNVTMINQPS 175
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +3
Query: 54 SKIGGNRIPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTTP 221
S G+ + TPG T+ S ST STS+ P+ A + STT +T+ P
Sbjct: 530 STTSGSTVSTTPGASTTSGSTQSTTSGPSTSSGPSTA--SRSTVSTTSGPSTTSGP 583
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -1
Query: 346 EPKAGVVVPNTGAAELAPKAGVEPKPGVLVVPKAGVVDAPKAGVVVEPNAGVVEPKPA 173
EP+ ++ PNT L PK V PKP L G++ + V N+ +P P+
Sbjct: 66 EPQE-LITPNTTRRSLGPKPTVAPKPLFL----NGLLPSSSTSDVSSQNSPKCDPHPS 118
>U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical
protein T26A5.5b protein.
Length = 505
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 35 LSFSGNLKNWR*PYTCNPRIWHDCNISAINRPFWEYICYSSARIWY 172
+SF+G K + P+ P++ + C +S N +I +S +WY
Sbjct: 127 ISFNGRDKKFYNPHHTFPKVQNYCLMSVANCYTDFHIDFSGTSVWY 172
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 35 LSFSGNLKNWR*PYTCNPRIWHDCNISAINRPFWEYICYSSARIWY 172
+SF+G K + P+ P++ + C +S N +I +S +WY
Sbjct: 127 ISFNGRDKKFYNPHHTFPKVQNYCLMSVANCYTDFHIDFSGTSVWY 172
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 27.1 bits (57), Expect = 9.9
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -1
Query: 352 AVEPKAGVVVPNTGAAELAPKAGVEPKPGVLVVPKAGVVDAPKAGVVVEPNAGVVEPKPA 173
A P G A E AP A P+P P AP G AG P PA
Sbjct: 318 AAAPAGGYDGGAGAAPEAAPAAAAAPQPA----PAPAAAAAPAGGYQGGAAAGAAAPPPA 373
Query: 172 VPNAGA 155
A A
Sbjct: 374 PAAAAA 379
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,991,462
Number of Sequences: 27780
Number of extensions: 277215
Number of successful extensions: 1247
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -