Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9i09
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   1.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   6.8  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   9.0  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   9.0  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   9.0  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 327 WFQILELQN*LQKRVLNQNLEYLLYQRPEWS 235
           WF+I       + R LN      LY+R EWS
Sbjct: 31  WFEIWRDSLPTKMRELNATACAALYERVEWS 61


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 275 WFNTRFWS*FCSSSIW 322
           +F    WS FCS  IW
Sbjct: 351 FFVVNLWSGFCSQCIW 366


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 573 WLYQWLPIVQTLFG*LLY 520
           W++ WLP+++     L+Y
Sbjct: 542 WIHPWLPLLRNRLDTLIY 559


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 109 VAVMPNPGVAGIRLPPIFEI 50
           VAV+  P    ++LPP++E+
Sbjct: 144 VAVIHRPDTKLMKLPPMYEV 163


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 109 VAVMPNPGVAGIRLPPIFEI 50
           VAV+  P    ++LPP++E+
Sbjct: 144 VAVIHRPDTKLMKLPPMYEV 163


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 106 AVMPNPGVAGIRLPPIFEI 50
           AV+  P    I+LPP++E+
Sbjct: 147 AVITRPDTKFIQLPPLYEM 165


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 106 AVMPNPGVAGIRLPPIFEI 50
           AV+  P    I+LPP++E+
Sbjct: 147 AVITRPDTKFIQLPPLYEM 165


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 177 GFGSTTPAFGSTTTP 221
           G GSTTPA  + +TP
Sbjct: 20  GGGSTTPASPTLSTP 34


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/33 (30%), Positives = 12/33 (36%)
 Frame = +2

Query: 449 YFRWFWDTASYYINYWVGSEFWSWYSNYPNRVW 547
           YFR FW           G E  S  S +   +W
Sbjct: 62  YFRQFWTDPRLAFKKRTGVETLSVGSEFIKNIW 94


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/33 (30%), Positives = 12/33 (36%)
 Frame = +2

Query: 449 YFRWFWDTASYYINYWVGSEFWSWYSNYPNRVW 547
           YFR FW           G E  S  S +   +W
Sbjct: 62  YFRQFWTDPRLAFKKRTGVETLSVGSEFIKNIW 94


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/33 (30%), Positives = 12/33 (36%)
 Frame = +2

Query: 449 YFRWFWDTASYYINYWVGSEFWSWYSNYPNRVW 547
           YFR FW           G E  S  S +   +W
Sbjct: 1   YFRQFWTDPRLAFKKRTGVETLSVGSEFIKNIW 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,168
Number of Sequences: 438
Number of extensions: 3711
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)