Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9i03
(626 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2... 52 7e-08
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 30 0.24
SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|c... 29 0.73
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 28 0.96
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 27 1.7
SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 27 1.7
SPCC16A11.07 |coq10||ubiquinone binding protein Coq10|Schizosacc... 26 3.9
SPBC651.07 |csa1||sequence orphan|Schizosaccharomyces pombe|chr ... 26 5.1
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 26 5.1
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 25 6.8
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 25 6.8
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 25 6.8
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c... 25 6.8
SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual 25 9.0
SPBC609.02 |ptn1||phosphatidylinositol-3,4,5-trisphosphate3-phos... 25 9.0
SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual 25 9.0
SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein glycos... 25 9.0
>SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 52.0 bits (119), Expect = 7e-08
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Frame = +1
Query: 373 WNDFYRINDIYNWLKDLKDKYPEFVKVESIGTTYEKRPILAV-----HVTLPGSKLRSK- 534
+ + + I +WL+ + Y + ++ +G T E R IL + H + G K+R+K
Sbjct: 180 FKSYQNLESINSWLRLMASLYKDLSELVPVGITAEGRTILGLKLNGRHPSDNGEKIRNKK 239
Query: 535 -VIVEGGIHAREWIGPCFVTYMLQQIL 612
+I++GG HAREWIG V Y Q+L
Sbjct: 240 VIIIQGGSHAREWIGIPSVCYAAWQLL 266
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 30.3 bits (65), Expect = 0.24
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 199 GSLYK-PIDFVLAPGDKKVFLKMAEEYDVYLS 291
GS+Y+ PID + +PG++ F ++ + VYLS
Sbjct: 87 GSVYQQPIDIIFSPGEEVFFERVGGDIPVYLS 118
>SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 606
Score = 28.7 bits (61), Expect = 0.73
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 202 SLY-KPIDFVLAPGDKKVFLKMAEEYDVYLSTLIADV--QRAFDMQRVKSYIRRNLGSF 369
S+Y K DF P V +A EY + +S ++ DV +RA +Q + N+G +
Sbjct: 366 SVYNKYFDFTNPPSRSCVAAPLASEYRIVMSCIVGDVTEKRALHVQGQSYWAPANIGPY 424
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 28.3 bits (60), Expect = 0.96
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Frame = +1
Query: 40 FYLISFLLFHPNYCATK--KYTNYTLYRG--VPVNKSHLDFFNSLSEMFDVN-FWTPPGS 204
F+L+S +F+P YC + NYTL +N HL++F + + + F
Sbjct: 462 FFLLSHEMFNPFYCLFEYSSVDNYTLQINPHSGINPEHLNYFKFIGRVIGLAIFHRRFVD 521
Query: 205 LYKPIDFVLAPGDKKVFLKMAEEYDV-YLSTLI 300
+ + F KKV L+ E D Y +L+
Sbjct: 522 AFFVVSFYKMILQKKVTLQDMESMDAEYYRSLV 554
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 40 FYLISFLLFHPNYCATK--KYTNYTLYRG--VPVNKSHLDFFNSLSEM 171
F+L+S +F P YC + NYTL +N HL++F + +
Sbjct: 481 FFLLSHKMFDPIYCLFEYSAVDNYTLQINPHSSINPEHLNYFRFIGRV 528
>SPBP8B7.10c |||U3 snoRNP-associated protein Utp16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 455 STFTNSGYLSFRSFNQL 405
S++TNSG SF+SFN L
Sbjct: 68 SSYTNSGQKSFKSFNSL 84
>SPCC16A11.07 |coq10||ubiquinone binding protein
Coq10|Schizosaccharomyces pombe|chr 3|||Manual
Length = 164
Score = 26.2 bits (55), Expect = 3.9
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = +1
Query: 4 RQNSLCPQKMS-LFYLIS----FLLFHPNYCATKKYTNYTLYRGVPVNKSHLDFFNSLSE 168
R + L P K S LF LIS + F P +C K T Y G P F L E
Sbjct: 14 RASRLMPYKPSFLFSLISNVNEYERFVP-FCQKSKVTEYDPKTGYPTKADLTVGFKGLCE 72
Query: 169 MFDVNFWTPPGSL 207
FD P +L
Sbjct: 73 TFDSKVVCDPVAL 85
>SPBC651.07 |csa1||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 268
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 281 TSYSSAIFRKTFLSPGAKTKSIGLYKEPGGVQKLTS 174
+ Y+SA+ T L G++T +I + + +QKL S
Sbjct: 161 SGYASALHTLTQLDDGSETNAINVSTQKFAIQKLQS 196
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 169 MFDVNFWTPPGSLYKPIDFVLAPGDKKVFL 258
+FD N W PPG K DFV + FL
Sbjct: 359 LFDQNEWLPPGE--KQFDFVFDESQQIDFL 386
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 130 NKSHLDFFNSLSEMFDVNFWTPPGSLYKPI--DFVLAPG 240
NK DF S ++ + + FW P + I + APG
Sbjct: 147 NKEIFDFLQSAAKKYGIQFWGPGSGIIHQIVLENYAAPG 185
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 298 IADVQRAFDMQRVKSYIRRNLGSFDWNDFYRINDIY 405
IAD+ + + LGSFDW R D Y
Sbjct: 60 IADLVAKMKTAKQNGFPNSQLGSFDWGMIKRKRDAY 95
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 457 FLLSRIQDIYLLDPSTN 407
FLLS++Q + LDPST+
Sbjct: 91 FLLSKLQSLLSLDPSTD 107
>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 270 FCHFQENLFVSGSQNKIYRFVQRARRSPKINVKHLTQAVEEI*MTFID 127
FCHF + LF + S+ K++ ++ K+N A +I F++
Sbjct: 213 FCHFAQELFQNSSKVKVFVHDEKWIDEQKMNGLLTVNAGSDIPPRFLE 260
>SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 405
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 415 KDLKDKYPEFVKVESIGTTYEKRPILAVHVTLPGSK 522
+ LKD+YP +K SI E+ +A +L G K
Sbjct: 39 RSLKDEYPRKIKHHSIDLLNEEPKDIAKKFSLEGVK 74
>SPBC609.02 |ptn1||phosphatidylinositol-3,4,
5-trisphosphate3-phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -3
Query: 612 ENLLKHVRHKTRTYPFSGMNTAFHNHFGPQFTSRQSDMHSENG 484
++LL V K + Y S + FH HF P + ++ + G
Sbjct: 267 KDLLLRVERKGQFYFPSSVQCWFHTHFQPMLVEYTNGINFQQG 309
>SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 380 SFQSNEPKFLLMYDLTLCISNALCTSAMSVDKYTSY 273
+F +N+P LT +S LC S +D +Y
Sbjct: 119 AFMANDPSMKYWLKLTNQLSGLLCASLNYIDSSNTY 154
>SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein
glycosyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 268 EEYDVYLSTLIADVQRAFDMQRVK 339
E+Y VYL+TL D D+QR +
Sbjct: 132 EQYLVYLTTLYLDSPYTTDLQRTR 155
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,827,112
Number of Sequences: 5004
Number of extensions: 62236
Number of successful extensions: 188
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -