Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9h22
         (425 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00049-2|AAC47052.2|  327|Caenorhabditis elegans Serpentine rece...    28   3.2  
Z81499-1|CAB04087.1|  471|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr...    26   9.8  
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr...    26   9.8  
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr...    26   9.8  

>U00049-2|AAC47052.2|  327|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 2 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = -3

Query: 372 HTGLEYDLARRSCNFFKPMPRFLILLYNLPGF*VIVVQDTHVSTST*YMTNFVLTRSNFT 193
           H  + Y L  +  N +     +++ + +      +VVQD   +    YMT F    S F 
Sbjct: 48  HARILYILLWKHRNLYLKQSFYILFIMSCIACFTLVVQDIFFARVFQYMTQFCEPMSEFV 107

Query: 192 EKYSPF 175
           E Y  F
Sbjct: 108 ENYPIF 113


>Z81499-1|CAB04087.1|  471|Caenorhabditis elegans Hypothetical
           protein F11C3.1 protein.
          Length = 471

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 197 LLKSIRRLFVRELYFENYIYVNFNFRV 117
           LL +I  LF  E Y E Y+Y +F+  +
Sbjct: 109 LLNAICGLFKSEYYLEKYMYYDFSLNI 135


>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
           protein H19N07.2c protein.
          Length = 1135

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 219 NSSYIMLTLKRVYLELQ*LRNRVNYKAISRI*AW 320
           N S I+L ++RV+ ELQ     V   +++R   W
Sbjct: 231 NESNIVLAMQRVFYELQMASEAVETNSLTRAFGW 264


>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
           protein H19N07.2b protein.
          Length = 1130

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 219 NSSYIMLTLKRVYLELQ*LRNRVNYKAISRI*AW 320
           N S I+L ++RV+ ELQ     V   +++R   W
Sbjct: 231 NESNIVLAMQRVFYELQMASEAVETNSLTRAFGW 264


>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
           protein H19N07.2a protein.
          Length = 1133

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 219 NSSYIMLTLKRVYLELQ*LRNRVNYKAISRI*AW 320
           N S I+L ++RV+ ELQ     V   +++R   W
Sbjct: 231 NESNIVLAMQRVFYELQMASEAVETNSLTRAFGW 264


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,971,634
Number of Sequences: 27780
Number of extensions: 143849
Number of successful extensions: 282
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)