Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9h22
         (425 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   3.3  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   3.3  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   4.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   4.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   5.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   5.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.6  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 200 ILLKSIRRLFVRELYFENYIYVNFN 126
           ++L  +   +  ELY + Y YVN +
Sbjct: 9   LILSLLTWTYAEELYSDKYDYVNID 33


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 200 ILLKSIRRLFVRELYFENYIYVNFN 126
           ++L  +   +  ELY + Y YVN +
Sbjct: 9   LILSLLTWTYAEELYSDKYDYVNID 33


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein
          protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 60 KQMLYKLFFIFII 98
          KQ +Y+LFFI I+
Sbjct: 7  KQQVYQLFFIQIV 19


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 137 RKYSFQ-NKVLEQINGEYFSVKLDLVKTK 220
           R+++ + +KVLE   G+Y   K D +K K
Sbjct: 34  RRFTIELDKVLESPRGKYEFSKYDKLKKK 62


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 179 GEYFSVKLDLV-KTKFVIYYVDV 244
           GEY  +K+DL+ K +F  Y + +
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQI 248


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 179 GEYFSVKLDLV-KTKFVIYYVDV 244
           GEY  +K+DL+ K +F  Y + +
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQI 248


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 344 GGPVIFLSPCLDS 306
           GGP I  +P LDS
Sbjct: 372 GGPTILTTPGLDS 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,829
Number of Sequences: 438
Number of extensions: 2227
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)