Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9h15
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical... 126 1e-29
AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical... 126 1e-29
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 121 4e-28
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 116 9e-27
Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical pr... 116 2e-26
AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine syn... 108 3e-24
U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z p... 27 7.0
AC006723-5|AAK68424.1| 575|Caenorhabditis elegans Hypothetical ... 27 7.0
Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical p... 27 9.3
Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical p... 27 9.3
>AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical
protein Y105C5B.28b protein.
Length = 385
Score = 126 bits (303), Expect = 1e-29
Identities = 58/116 (50%), Positives = 76/116 (65%)
Frame = +1
Query: 217 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 396
FLNL K A Y+WID SG N+R+K R D EP D E +P W++DGSSTGQ++ DS
Sbjct: 19 FLNLD-QKGMYQALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADS 77
Query: 397 DITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWF 564
D+ L PVA+Y DPFR+ + +V+CETY ++ PT TN+R + K DQ PWF
Sbjct: 78 DVYLKPVAIYPDPFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWF 133
>AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical
protein Y105C5B.28a protein.
Length = 388
Score = 126 bits (303), Expect = 1e-29
Identities = 58/116 (50%), Positives = 76/116 (65%)
Frame = +1
Query: 217 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 396
FLNL K A Y+WID SG N+R+K R D EP D E +P W++DGSSTGQ++ DS
Sbjct: 22 FLNLD-QKGMYQALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADS 80
Query: 397 DITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWF 564
D+ L PVA+Y DPFR+ + +V+CETY ++ PT TN+R + K DQ PWF
Sbjct: 81 DVYLKPVAIYPDPFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWF 136
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 121 bits (291), Expect = 4e-28
Identities = 57/121 (47%), Positives = 78/121 (64%)
Frame = +1
Query: 202 AYYNYFLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQS 381
A ++F+ LP K ATYVWID +G +LR+K R ++ +P L P W+YDGSSTGQ+
Sbjct: 15 ATIDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWNYDGSSTGQA 74
Query: 382 DLKDSDITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPW 561
D +SD L PVAV+ DPF +++V+C+T E PT TNHR A + K+ DQ+PW
Sbjct: 75 DGLNSDRYLRPVAVFPDPFLGGLNVLVMCDTLDHEMKPTATNHRQMCAELMKKVSDQQPW 134
Query: 562 F 564
F
Sbjct: 135 F 135
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 116 bits (280), Expect = 9e-27
Identities = 54/121 (44%), Positives = 76/121 (62%)
Frame = +1
Query: 202 AYYNYFLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQS 381
A ++F+ LP +K ATYVWID +G LR+K R + +P L P W+YDGSSTGQ+
Sbjct: 15 ATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGSSTGQA 74
Query: 382 DLKDSDITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPW 561
+ +SD L PVAV+ DPF + +++V+CET PT TNHR + A + K+ + PW
Sbjct: 75 EGLNSDRYLRPVAVFPDPFLQGHNVLVMCETLDETMKPTATNHRQNCAAIMKKVAEHHPW 134
Query: 562 F 564
F
Sbjct: 135 F 135
>Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical
protein K03H1.1 protein.
Length = 367
Score = 116 bits (278), Expect = 2e-26
Identities = 59/121 (48%), Positives = 74/121 (61%)
Frame = +1
Query: 202 AYYNYFLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQS 381
A + FL L KI ATYVWID +G NLRSK R DK P +E P W+YDGSSTGQ+
Sbjct: 15 AVIDQFLGLRPHPTKIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSSTGQA 74
Query: 382 DLKDSDITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPW 561
+DSD L PVA Y DPF + +V+C+T + PT T+HR + A + +I D PW
Sbjct: 75 KGRDSDRYLRPVAAYPDPFLGGGNKLVMCDTLDHQMQPTATSHRQACAEIMHEIRDTRPW 134
Query: 562 F 564
F
Sbjct: 135 F 135
>AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine
synthetase (glutamate-ammonia ligase) protein 1 protein.
Length = 340
Score = 108 bits (259), Expect = 3e-24
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = +1
Query: 241 NKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDSDITLLPVA 420
N Y+WIDA+ N+R K + D EP +P W++DG+STGQS + SD+ + P+A
Sbjct: 29 NNYQVMYIWIDATQENMRGKTKTFDFEPKTPSDLPIWNFDGTSTGQSLGEGSDVYIRPIA 88
Query: 421 VYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWF 564
+YRDPFR P+ I LCET + + P PTN R + K DQEPWF
Sbjct: 89 LYRDPFRPGPNKIALCETLTHDNKPHPTNTRQQCVDNMEKAKDQEPWF 136
>U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical
protein Y102E9.2 protein.
Length = 388
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/63 (26%), Positives = 35/63 (55%)
Frame = -2
Query: 464 KTIICGLLRKGSLYTATGSSVISESFRSDCPVELPSYDHFGTISKSQGSLSNIRSLDRKF 285
+T++ L + SL T T S++ ES C + D+F + +S L ++ ++++KF
Sbjct: 265 ETVVIVDLNQESLQT-TSVSIVGES---QCLDIASTKDYFAVLGRSTVHLIDLNNMEQKF 320
Query: 284 IPL 276
+P+
Sbjct: 321 VPI 323
>AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z
protein 1 protein.
Length = 306
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 181 GHPGSHDAYYNYFLNLPFPKNKIFATYVWIDASGINLRSKDR 306
G H Y + F + T+ W DA+GIN S DR
Sbjct: 43 GRVFEHKRYDRIYETEDFDSEDLPKTWDWRDANGINYASADR 84
>AC006723-5|AAK68424.1| 575|Caenorhabditis elegans Hypothetical
protein Y19D10B.5 protein.
Length = 575
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 274 HQSIHRWQKFYFSETVN-LKSNCSTHHAILDAQRYC*YLNNKHVSYFYTLNSLIG 113
HQ I ++ + SETV +NCST A L R C ++ S F + LIG
Sbjct: 219 HQCIF-YEYYINSETVTWFPTNCSTVCADLKIDRICDLTEDQLKSTFRNMKHLIG 272
>Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 457 IVLCETYSSEGLPTPTNHRV 516
IV ETY++ LPTP N RV
Sbjct: 414 IVYSETYTATNLPTPYNVRV 433
>Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 457 IVLCETYSSEGLPTPTNHRV 516
IV ETY++ LPTP N RV
Sbjct: 414 IVYSETYTATNLPTPYNVRV 433
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,975,938
Number of Sequences: 27780
Number of extensions: 275116
Number of successful extensions: 692
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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