Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9h13
         (400 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2305|AAN13731.1|   91|Drosophila melanogaster CG5184-PB...    31   0.43 
AE014297-420|AAF51901.1|  274|Drosophila melanogaster CG15591-PA...    27   7.0  
AY070882-1|AAL48504.1|  518|Drosophila melanogaster LD16673p pro...    27   9.2  
AY060442-1|AAL25481.1|  518|Drosophila melanogaster LD47433p pro...    27   9.2  
AE013599-1652|AAF58414.3|  518|Drosophila melanogaster CG17724-P...    27   9.2  

>AE014297-2305|AAN13731.1|   91|Drosophila melanogaster CG5184-PB,
           isoform B protein.
          Length = 91

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 234 CPMATFAKHPTTKLFVHKSDK 172
           CP ATFA HPTT+LF  +  K
Sbjct: 67  CPSATFAFHPTTQLFPSRITK 87


>AE014297-420|AAF51901.1|  274|Drosophila melanogaster CG15591-PA
           protein.
          Length = 274

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 110 GAFLKIPIGFESSAVPL*Y*HLSDLCTKSLVVGCLAKV 223
           GA + IP+    + VPL Y  L+ L  K+L+V  LA V
Sbjct: 178 GAMIMIPLLLGGTIVPLAYGALAMLAGKALIVSKLALV 215


>AY070882-1|AAL48504.1|  518|Drosophila melanogaster LD16673p
           protein.
          Length = 518

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 230 RWQPLPNIQLPNFLYINPINASTKVEPPRTRSQLESSG 117
           R  P+PN    + +     NA+  + PP+T S   SSG
Sbjct: 114 RTSPMPNPPAQSHVPPTTRNATNAILPPKTNSSSSSSG 151


>AY060442-1|AAL25481.1|  518|Drosophila melanogaster LD47433p
           protein.
          Length = 518

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 230 RWQPLPNIQLPNFLYINPINASTKVEPPRTRSQLESSG 117
           R  P+PN    + +     NA+  + PP+T S   SSG
Sbjct: 114 RTSPMPNPPAQSHVPPTTRNATNAILPPKTNSSSSSSG 151


>AE013599-1652|AAF58414.3|  518|Drosophila melanogaster CG17724-PA,
           isoform A protein.
          Length = 518

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 230 RWQPLPNIQLPNFLYINPINASTKVEPPRTRSQLESSG 117
           R  P+PN    + +     NA+  + PP+T S   SSG
Sbjct: 114 RTSPMPNPPAQSHVPPTTRNATNAILPPKTNSSSSSSG 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,749,195
Number of Sequences: 53049
Number of extensions: 308487
Number of successful extensions: 789
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)