Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9h09
         (611 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    24   4.4  
EF426240-1|ABO26483.1|   64|Anopheles gambiae unknown protein.         23   5.9  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   7.8  

>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 225 EERMPYPVIVAFGILKKAAAKVNIEYGLEKKIADAIMQACDDVISGKL 368
           E R+  P I     + K+  K +  YG  + + D I +A D +I+GK+
Sbjct: 170 EGRLGMPAINVNDSVTKS--KFDNLYGCRESLLDGIKRATDVMIAGKV 215


>EF426240-1|ABO26483.1|   64|Anopheles gambiae unknown protein.
          Length = 64

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = -1

Query: 494 LAAQFPAQYLYGAVRNHLVRVHVGLSTGASLPDDEGEVTLAVELPADDV 348
           + AQ    +++  V  HL   +  ++     PD        + +PADDV
Sbjct: 16  VGAQVAGGFMWWWVLRHLFHEYEHITGEFDYPDPSSWTNAELGIPADDV 64


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 282 AKVNIEYGLEKKIADAIMQACDDVISGKLYREGHFPLVIWQT 407
           A+  +  G+  K  D I Q C+  + GK+ R+   P+   QT
Sbjct: 30  AREGLAKGISIKKCD-IFQTCECCVEGKIARKPFPPITERQT 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,372
Number of Sequences: 2352
Number of extensions: 14078
Number of successful extensions: 70
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)