Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9h09
         (611 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.2  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.2  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   9.5  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   9.5  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   9.5  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   9.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.5  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 372 REGHFPLVIWQTGSGTQSNMNTNEV 446
           R G  PL++W  G G  S   T +V
Sbjct: 154 RNGLLPLLVWIYGGGFMSGTATLDV 178


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 372 REGHFPLVIWQTGSGTQSNMNTNEV 446
           R G  PL++W  G G  S   T +V
Sbjct: 154 RNGLLPLLVWIYGGGFMSGTATLDV 178


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 99  PEGKPVKTRKEKDTFGELDVPDDKLYGAQTV 191
           PE K ++T  + D FGE  +  D L  A  +
Sbjct: 275 PEEKYIRTLSKGDFFGEKALQGDDLRTANII 305


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 113 RLAFWVETCR 84
           RLAFW  TCR
Sbjct: 367 RLAFWRLTCR 376


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/24 (41%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = -3

Query: 72  LFTTKN-LSTVKFRVKQLTVYVKY 4
           L T+++ LS++ FRV Q T Y+++
Sbjct: 301 LLTSRDFLSSLAFRVFQSTQYIRH 324


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 377 GSLPPRHLADWLRYSVQHEHER 442
           G+ PPR L  W+  S+Q +  R
Sbjct: 132 GNFPPRPLGPWI--SIQEQIPR 151


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 377 GSLPPRHLADWLRYSVQHEHER 442
           G+ PPR L  W+  S+Q +  R
Sbjct: 132 GNFPPRPLGPWI--SIQEQIPR 151


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 377 GSLPPRHLADWLRYSVQHEHER 442
           G+ PPR L  W+  S+Q +  R
Sbjct: 132 GNFPPRPLGPWI--SIQEQIPR 151


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 377 GSLPPRHLADWLRYSVQHEHER 442
           G+ PPR L  W+  S+Q +  R
Sbjct: 132 GNFPPRPLGPWI--SIQEQIPR 151


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 561 WRWGTCRSSSATCSRGRWDAPGP 493
           ++ G C+ +  T S+ +W  P P
Sbjct: 20  YKQGFCQPTQRTMSKIQWRKPKP 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,709
Number of Sequences: 438
Number of extensions: 4044
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)