Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9h08
         (290 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094802-1|AAM11155.1|  424|Drosophila melanogaster LD24780p pro...    28   1.7  
AE014297-4788|AAN14284.1|  318|Drosophila melanogaster CG2261-PB...    28   1.7  
AE014297-4787|AAF57183.1|  424|Drosophila melanogaster CG2261-PA...    28   1.7  

>AY094802-1|AAM11155.1|  424|Drosophila melanogaster LD24780p
           protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -3

Query: 240 RHRNGHKIRXVLVDYTTHVAK*STH*RHEIYFSKSKPQIVKLANXQK*TLTLVH 79
           R + GH +   L D+T  V+    H +  I  S S+   VKL +  K ++   H
Sbjct: 151 REQQGHPVIRTLYDHTDEVSYLEFHPKEHILASASRDGTVKLFDIAKPSVKKAH 204


>AE014297-4788|AAN14284.1|  318|Drosophila melanogaster CG2261-PB,
           isoform B protein.
          Length = 318

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -3

Query: 240 RHRNGHKIRXVLVDYTTHVAK*STH*RHEIYFSKSKPQIVKLANXQK*TLTLVH 79
           R + GH +   L D+T  V+    H +  I  S S+   VKL +  K ++   H
Sbjct: 151 REQQGHPVIRTLYDHTDEVSYLEFHPKEHILASASRDGTVKLFDIAKPSVKKAH 204


>AE014297-4787|AAF57183.1|  424|Drosophila melanogaster CG2261-PA,
           isoform A protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -3

Query: 240 RHRNGHKIRXVLVDYTTHVAK*STH*RHEIYFSKSKPQIVKLANXQK*TLTLVH 79
           R + GH +   L D+T  V+    H +  I  S S+   VKL +  K ++   H
Sbjct: 151 REQQGHPVIRTLYDHTDEVSYLEFHPKEHILASASRDGTVKLFDIAKPSVKKAH 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,603,463
Number of Sequences: 53049
Number of extensions: 158951
Number of successful extensions: 175
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 485663193
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)