Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9h07
         (314 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL133061-1|CAB61385.1|  424|Homo sapiens hypothetical protein pr...    28   5.0  
AB023173-1|BAA76800.1|  672|Homo sapiens KIAA0956 protein protein.     28   5.0  

>AL133061-1|CAB61385.1|  424|Homo sapiens hypothetical protein
           protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 309 FLNILLFIHSEVLHIIIYTFIIYSFHKH 226
           FL+ LLF+H    +I I T + Y F+K+
Sbjct: 106 FLSKLLFVHGHFYYIRIATLVQYFFYKN 133


>AB023173-1|BAA76800.1|  672|Homo sapiens KIAA0956 protein protein.
          Length = 672

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 309 FLNILLFIHSEVLHIIIYTFIIYSFHKH 226
           FL+ LLF+H    +I I T + Y F+K+
Sbjct: 354 FLSKLLFVHGHFYYIRIATLVQYFFYKN 381


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,648,772
Number of Sequences: 237096
Number of extensions: 755125
Number of successful extensions: 1232
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)